RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TMEM230Q96A57 120 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TMEM222Q9H0R3 208 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 TMEM14BQ9NUH8 114 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 FKBP11Q9NYL4 201 aa12.59□□□□□ -0.39
MSH5-SAPCD1-206ENST00000491552 IGHV4OR15-8A0A075B7B6 117 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 A0A087WW49 117 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 LINC01619G3V211 115 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RBMXL2O75526 392 aaKnown RBP12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DHFRP00374 187 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 REG1AP05451 166 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DHODHQ02127 395 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 C19orf35Q6ZS72 473 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OR5B3Q8NH48 314 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 MCRIP2Q9BUT9 160 aaKnown RBP12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 AKIP1Q9NQ31 210 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 BATF3Q9NR55 127 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 NAP1L6A6NFF2 107 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OR2J3O76001 311 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 P0C879 139 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IL7P13232 177 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 BEAN1Q3B7T3 259 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 LINC00299Q6ZSB3 139 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HSD17B13Q7Z5P4 300 aaPredicted RBP12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 NECAP1Q8NC96 275 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OR10W1Q8NGF6 305 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 GLYATL2Q8WU03 294 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 SLC25A21Q9BQT8 299 aaPredicted RBP12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 GPR61Q9BZJ8 451 aa12.57□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 CDS2O95674 445 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DEFA4P12838 97 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 AKR1C4P17516 323 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 EXOSC2Q13868 293 aaKnown RBP12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 KPRPQ5T749 579 aaPredicted RBP12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ZNF343Q6P1L6 599 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 LHFPL5Q8TAF8 219 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RBPMSQ93062 196 aaKnown RBP12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 GALNT14Q96FL9 552 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMEM56Q96MV1 263 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 FANCD2OSQ96PS1 177 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 KCNIP3Q9Y2W7 256 aa12.56□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 LINC00854A0A1B0GVQ3 168 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OR13C7P0DN81 318 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 SLURP1P55000 103 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DEFA6Q01524 100 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 WT1-ASQ06250 92 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMEM187Q14656 261 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 KLK9Q2XQG4 91 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 C15orf32Q32M92 178 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMEM268Q5VZI3 342 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMED4Q7Z7H5 227 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 FAM219AQ8IW50 185 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 C7orf50Q9BRJ6 194 aaKnown RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 KLK9Q9UKQ9 250 aa12.55□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 CENPXA8MT69 81 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 CYB5BO43169 146 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ANXA3P12429 323 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 CCR6P51684 374 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DCUN1D4Q92564 292 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 A0A0B4J293 547 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 A0A0G2JRQ6 117 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 OVOL1O14753 267 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 NDUFB8O95169 186 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 ZP3P21754 424 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HOXD3P31249 432 aaPredicted RBP12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
MSH5-SAPCD1-206ENST00000491552 CCDC32Q9BV29 185 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms