RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 TMEM127O75204 238 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 PMP2P02689 132 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 OR13C7P0DN81 318 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMPD4-220ENST00000491319 TAS2R20P59543 309 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 ERVK-16P61578 105 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 TMEM69Q5SWH9 247 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 THOC7Q6I9Y2 204 aaKnown RBP11.74□□□□□ -0.53
SMPD4-220ENST00000491319 IL17DQ8TAD2 202 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 S100A16Q96FQ6 103 aaKnown RBP11.74□□□□□ -0.53
SMPD4-220ENST00000491319 GGTLC1Q9BX51 225 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 ZNF436Q9C0F3 470 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-220ENST00000491319 THYN1Q9P016 225 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 HYDINQ4G0P3 5121 aa11.74□□□□□ -0.53
SMPD4-220ENST00000491319 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 TEX50A0A1B0GTY4 177 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 JTBO76095 146 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 SERPINE2P07093 398 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 TRAPPC2P0DI81 140 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 TRAPPC2BP0DI82 140 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 F2RP25116 425 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
SMPD4-220ENST00000491319 MFAP2P55001 183 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 EPPK1P58107 5090 aaKnown RBP11.73□□□□□ -0.53
SMPD4-220ENST00000491319 DHRS11Q6UWP2 260 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 CROCCP3Q8IVE0 287 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 OR1L6Q8NGR2 347 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 FCAMRQ8WWV6 532 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
SMPD4-220ENST00000491319 NSG2Q9Y328 171 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
SMPD4-220ENST00000491319 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-220ENST00000491319 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 PGLYRP1O75594 196 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-220ENST00000491319 KRASP01116 189 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 G6PCP35575 357 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 LPAR6P43657 344 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-220ENST00000491319 LSM3P62310 102 aaKnown RBP11.72□□□□□ -0.53
SMPD4-220ENST00000491319 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
SMPD4-220ENST00000491319 OR1L8Q8NGR8 309 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 OVOL2Q9BRP0 275 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 NDUFA4L2Q9NRX3 87 aa11.72□□□□□ -0.53
SMPD4-220ENST00000491319 CYB5BO43169 146 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 NAT1P18440 290 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 TAS2R46P59540 309 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 HSD17B13Q7Z5P4 300 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-220ENST00000491319 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.53
SMPD4-220ENST00000491319 DGCR14Q96DF8 476 aaKnown RBP11.71□□□□□ -0.53
SMPD4-220ENST00000491319 YIPF6Q96EC8 236 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 BSCL2Q96G97 398 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-220ENST00000491319 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 OR51B2Q9Y5P1 312 aa11.71□□□□□ -0.53
SMPD4-220ENST00000491319 F11RQ9Y624 299 aaKnown RBP11.71□□□□□ -0.53
SMPD4-220ENST00000491319 ALMS1Q8TCU4 4167 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 F8W735 103 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-220ENST00000491319 GPR31O00270 319 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 EIF4EP06730 217 aaKnown RBP11.7□□□□□ -0.54
SMPD4-220ENST00000491319 HRH1P35367 487 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 CMTM1Q8IZ96 169 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-220ENST00000491319 C5orf66Q9H5L9 145 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 DAZ1Q9NQZ3 744 aaKnown RBP11.7□□□□□ -0.54
SMPD4-220ENST00000491319 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
SMPD4-220ENST00000491319 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 K7EIM0 57 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 SNAPC5O75971 98 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 HLA-DMAP28067 261 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 PRSS3P35030 304 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 ADMP35318 185 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 PHLDA2Q53GA4 152 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 TSPAN14Q8NG11 270 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 C20orf24Q9BUV8 137 aa11.69□□□□□ -0.54
SMPD4-220ENST00000491319 NDUFA4O00483 81 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 TSPAN4O14817 238 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 ZNF207O43670 478 aaKnown RBP11.68□□□□□ -0.54
SMPD4-220ENST00000491319 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 SPSB3Q6PJ21 355 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 SLC38A6Q8IZM9 456 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 PRNDQ9UKY0 176 aa11.68□□□□□ -0.54
SMPD4-220ENST00000491319 C15orf61A6NNL5 157 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms