RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 PLET1Q6UQ28 207 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 CROCCP3Q8IVE0 287 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 SAMD12Q8N8I0 201 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 GDPD1Q8N9F7 314 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 MARC2Q969Z3 335 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 S100A16Q96FQ6 103 aaKnown RBP10.22□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
COL6A3-211ENST00000491233 THYN1Q9P016 225 aa10.22□□□□□ -0.77
COL6A3-211ENST00000491233 TGOLN2O43493 480 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 PMP2P02689 132 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 TRAPPC2P0DI81 140 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 TRAPPC2BP0DI82 140 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 OR13C7P0DN81 318 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 F2RP25116 425 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 PTBP1P26599 531 aaKnown RBP eCLIP10.21□□□□□ -0.77
COL6A3-211ENST00000491233 RFX2P48378 723 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 TAS2R46P59540 309 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 LSM3P62310 102 aaKnown RBP10.21□□□□□ -0.77
COL6A3-211ENST00000491233 WT1-ASQ06250 92 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 ZNF585BQ52M93 769 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 OR1L8Q8NGR8 309 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 OR5H2Q8NGV7 314 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 IL17DQ8TAD2 202 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 TMEM190Q8WZ59 177 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 GGTLC1Q9BX51 225 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 HINT2Q9BX68 163 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 UFC1Q9Y3C8 167 aa10.21□□□□□ -0.77
COL6A3-211ENST00000491233 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 TEX50A0A1B0GTY4 177 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 CYB5BO43169 146 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 PGLYRP1O75594 196 aaPredicted RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 JTBO76095 146 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 C8orf88P0DMB2 117 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 RPS19P39019 145 aaKnown RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 LPAR6P43657 344 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 ELLP55199 621 aaPredicted RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 ANKRD55Q3KP44 614 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 SLC25A24Q6NUK1 477 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 DHRS11Q6UWP2 260 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 HSD17B13Q7Z5P4 300 aaPredicted RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 OR1L6Q8NGR2 347 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 FCAMRQ8WWV6 532 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 LSM10Q969L4 123 aaKnown RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 YIPF6Q96EC8 236 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 ZNF436Q9C0F3 470 aaPredicted RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
COL6A3-211ENST00000491233 NSG2Q9Y328 171 aa10.2□□□□□ -0.78
COL6A3-211ENST00000491233 LOC102724200A0A096LPH7 203 aaPredicted RBP10.19□□□□□ -0.78
COL6A3-211ENST00000491233 IGHV3-21A0A0B4J1V1 117 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 GPR31O00270 319 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 KRASP01116 189 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 SERPINE2P07093 398 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 NAT1P18440 290 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 G6PCP35575 357 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 MFAP2P55001 183 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 RBPMS2Q6ZRY4 209 aaKnown RBP10.19□□□□□ -0.78
COL6A3-211ENST00000491233 DGCR14Q96DF8 476 aaKnown RBP10.19□□□□□ -0.78
COL6A3-211ENST00000491233 NDUFA4L2Q9NRX3 87 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
COL6A3-211ENST00000491233 F11RQ9Y624 299 aaKnown RBP10.19□□□□□ -0.78
COL6A3-211ENST00000491233 SNAPC5O75971 98 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
COL6A3-211ENST00000491233 PRSS3P35030 304 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 HRH1P35367 487 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 CMTM1Q8IZ96 169 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 TSPAN14Q8NG11 270 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 OR6F1Q8NGZ6 308 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 BSCL2Q96G97 398 aaPredicted RBP10.18□□□□□ -0.78
COL6A3-211ENST00000491233 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 C21orf62Q9NYP8 219 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 ALMS1Q8TCU4 4167 aa10.18□□□□□ -0.78
COL6A3-211ENST00000491233 HLA-DMAP28067 261 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 PHLDA2Q53GA4 152 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 OR2C3Q8N628 320 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 UBAC2Q8NBM4 344 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 SPAG8Q99932 426 aaPredicted RBP10.17□□□□□ -0.78
COL6A3-211ENST00000491233 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 CHRDL1Q9BU40 450 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 C20orf24Q9BUV8 137 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 C5orf66Q9H5L9 145 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 DAZ1Q9NQZ3 744 aaKnown RBP10.17□□□□□ -0.78
COL6A3-211ENST00000491233 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 PRNDQ9UKY0 176 aa10.17□□□□□ -0.78
COL6A3-211ENST00000491233 HYDINQ4G0P3 5121 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 IGHV3OR16-8A0A075B7F1 116 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 A0A087WXM4 84 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 DBX1A6NMT0 343 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 C15orf61A6NNL5 157 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 F8W735 103 aaPredicted RBP10.16□□□□□ -0.78
COL6A3-211ENST00000491233 K7EIM0 57 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 NDUFA4O00483 81 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 Q56UQ5 140 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 SPSB3Q6PJ21 355 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 LYSMD2Q8IV50 215 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 SLC38A6Q8IZM9 456 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 CADM3Q8N126 398 aa10.16□□□□□ -0.78
COL6A3-211ENST00000491233 OR5B3Q8NH48 314 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms