RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PLIN4Q96Q06 1357 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 A0A1B0GV50 99 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM223A0PJW6 202 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 LRP5LA4QPB2 252 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM235A6NFC5 223 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 RBFOX3A6NFN3 312 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF716A6NP11 495 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 IQCF5A8MTL0 148 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PRAMEF26H0Y7S4 382 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 K7EM74 188 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 MANBAO00462 879 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PIRO00625 290 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 FGF16O43320 207 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR1I1O60431 355 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TRAPPC6AO75865 159 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ETHE1O95571 254 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CDS2O95674 445 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CD8AP01732 235 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HLA-AP01891 365 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HBZP02008 142 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GYPAP02724 150 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 MT-ND6P03923 174 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GAPDHP04406 335 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 REG1AP05451 166 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CRYGCP07315 174 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CTSLP07711 333 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR5AL1P0C617 328 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 NBEAP1P0C6P0 100 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SLC35G6P0C7Q6 338 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF735P0CB33 412 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PGA4P0DJD7 388 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PGA5P0DJD9 388 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CTSEP14091 401 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SPNP16150 400 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GPX2P18283 190 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H1TP22492 207 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ATP6V0CP27449 155 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CHI3L1P36222 383 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 POLR2IP36954 125 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SRP14P37108 136 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CEACAM3P40198 252 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 AQP2P41181 271 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CD200P41217 278 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CRYBB2P43320 205 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GPR4P46093 362 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SLC11A1P49279 550 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PSMB3P49720 205 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 DAPP51397 102 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 NCBP2P52298 156 aaKnown RBP eCLIP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF140P52738 457 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CDKN2DP55273 166 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 UBE2NP61088 152 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 MAXP61244 160 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 FKBP1AP62942 108 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SEC11AP67812 179 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SLC35B1P78383 322 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CDK6Q00534 326 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SEMG2Q02383 582 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF92Q03936 586 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 AESQ08117 197 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM267Q0VDI3 215 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 AQP6Q13520 282 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GINS1Q14691 196 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SURF2Q15527 256 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 LTC4SQ16873 150 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 C18orf21Q32NC0 220 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HIKESHIQ53FT3 197 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OCIAD2Q56VL3 154 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 GCSAMLQ5JQS6 135 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF678Q5SXM1 525 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 C1orf220Q5T0J3 134 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CPTPQ5TA50 214 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 STUMQ69YW2 141 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 LAMTOR1Q6IAA8 161 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 FAHD1Q6P587 224 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TNFAIP8L2Q6P589 184 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 DUX4L9Q6RFH8 374 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 AGTRAPQ6RW13 159 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 HEPN1Q6WQI6 88 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 H2BFWTQ7Z2G1 175 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 BAGE3Q86Y29 109 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 BAGE2Q86Y30 109 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SNX29P2Q8IUI4 249 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SGPP2Q8IWX5 399 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 SLC35F2Q8IXU6 374 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 C20orf196Q8IYI0 205 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 BOD1L2Q8IYS8 172 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 PUSL1Q8N0Z8 303 aaKnown RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM251Q8N6I4 163 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 ZFP62Q8NB50 900 aaPredicted RBP1.52□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM229BQ8NBD8 167 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 CHST4Q8NCG5 386 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR11H7Q8NGC8 314 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR4M1Q8NGD0 313 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR10AD1Q8NGE0 317 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR6N1Q8NGY5 312 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR2T27Q8NH04 317 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR1P1Q8NH06 330 aa1.52□□□□□ -2.17
HMGN1-218ENST00000490032 OR4K13Q8NH42 304 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms