RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 LY6LH3BQJ8 138 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 S1PR2O95136 353 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 KRASP01116 189 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 PPT1P50897 306 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 TMEM177Q53S58 311 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 OR4A5Q8NH83 315 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 FAM213BQ8TBF2 198 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 MALSU1Q96EH3 234 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 RHOVQ96L33 236 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 Q96MF0 132 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 CLCC1Q96S66 551 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 TBX15Q96SF7 602 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 NABP2Q9BQ15 211 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
TRIM40-208ENST00000489892 C7orf69Q9H7B7 122 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.45□□□□□ -0.9
TRIM40-208ENST00000489892 HIF1ANQ9NWT6 349 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 FKBP11Q9NYL4 201 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
TRIM40-208ENST00000489892 TRAV1-1A0A0B4J248 108 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
TRIM40-208ENST00000489892 IGKV1-5P01602 117 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 HSPB1P04792 205 aaKnown RBP9.44□□□□□ -0.9
TRIM40-208ENST00000489892 CD1BP29016 333 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 BRS3P32247 399 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 HOXA1P49639 335 aaPredicted RBP9.44□□□□□ -0.9
TRIM40-208ENST00000489892 DYNLT3P51808 116 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 VMA21Q3ZAQ7 101 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 UTF1Q5T230 341 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 MOB3BQ86TA1 216 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 CBLN2Q8IUK8 224 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 OR4A16Q8NH70 328 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 SCRT1Q9BWW7 348 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 CACNG5Q9UF02 275 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 PRNDQ9UKY0 176 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 TIMM9Q9Y5J7 89 aa9.44□□□□□ -0.9
TRIM40-208ENST00000489892 IGHV1-69DA0A0B4J2H0 117 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 NPFFO15130 113 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 SYNGR2O43760 224 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 SOX15O60248 233 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 IGKV1-39P01597 117 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 IGKV1D-39P04432 117 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 G6PCP35575 357 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 TAGLN2P37802 199 aaKnown RBP9.43□□□□□ -0.9
TRIM40-208ENST00000489892 REG1BP48304 166 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 SERF2P84101 59 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 ATP6V1FQ16864 119 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 CYB5R2Q6BCY4 276 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 TMEM88Q6PEY1 159 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
TRIM40-208ENST00000489892 SPATA3Q8NHX4 192 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 SCGB1C1Q8TD33 95 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 PINX1Q96BK5 328 aaKnown RBP9.43□□□□□ -0.9
TRIM40-208ENST00000489892 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 BSCL2Q96G97 398 aaPredicted RBP9.43□□□□□ -0.9
TRIM40-208ENST00000489892 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
TRIM40-208ENST00000489892 BET1LQ9NYM9 111 aa9.43□□□□□ -0.9
TRIM40-208ENST00000489892 A0A1W2PPI3 338 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 C1orf196B1AJZ1 125 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 AGPAT2O15120 278 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 CHST1O43916 411 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 TGFAP01135 160 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 IFNA1P01562 189 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 P0C879 139 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 MAS1LP35410 378 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 BRWD1-AS2P59051 145 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 RPS16P62249 146 aaKnown RBP9.42□□□□□ -0.9
TRIM40-208ENST00000489892 KLRD1Q13241 179 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 HABP2Q14520 560 aaPredicted RBP9.42□□□□□ -0.9
TRIM40-208ENST00000489892 AARDQ4LEZ3 155 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 AWAT1Q58HT5 328 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
TRIM40-208ENST00000489892 SLC25A24Q6NUK1 477 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 Q71RC1 249 aaPredicted RBP9.42□□□□□ -0.9
TRIM40-208ENST00000489892 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 OR52E5Q8NH55 327 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 SH3BGRL3Q9H299 93 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 TMEM140Q9NV12 185 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 ARHGAP32A7KAX9 2087 aa9.42□□□□□ -0.9
TRIM40-208ENST00000489892 FBN1P35555 2871 aaKnown RBP9.42□□□□□ -0.9
TRIM40-208ENST00000489892 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 A0A087WWC5 75 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 COLCA2A8K830 154 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 B4DEV8 164 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 MOSP00540 346 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 FAM106CPP0CH98 169 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms