RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZNF773Q6PK81 442 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 ZNF367Q7RTV3 350 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 OR13F1Q8NGS4 319 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-217ENST00000489581 RARRES2Q99969 163 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
TOP3B-217ENST00000489581 CHRDL1Q9BU40 450 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
TOP3B-217ENST00000489581 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
TOP3B-217ENST00000489581 NDUFA4O00483 81 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 HPRT1P00492 218 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 NQO2P16083 231 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 TAS2R31P59538 309 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 ARPC4P59998 168 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 TBCEQ15813 527 aaPredicted RBP12.48□□□□□ -0.41
TOP3B-217ENST00000489581 GVQW1Q8N7I0 195 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 SLC5A7Q9GZV3 580 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 NDUFB11Q9NX14 153 aa12.48□□□□□ -0.41
TOP3B-217ENST00000489581 CYB5BO43169 146 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 RBFOX2O43251 390 aaKnown RBP eCLIP12.47□□□□□ -0.41
TOP3B-217ENST00000489581 SERPINE2P07093 398 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 FXYD4P59646 89 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
TOP3B-217ENST00000489581 MSMO1Q15800 293 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 SPSB3Q6PJ21 355 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 UBAC2Q8NBM4 344 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 BEST4Q8NFU0 473 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 C11orf45Q8TAV5 145 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-217ENST00000489581 HECTD4Q9Y4D8 3996 aa12.47□□□□□ -0.41
TOP3B-217ENST00000489581 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 TEX50A0A1B0GTY4 177 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 NOTOA8MTQ0 251 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 MPTX1A8MV57 137 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 F8W735 103 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-217ENST00000489581 K7EMT4 169 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 PPYP01298 95 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 IFNA4P05014 189 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 FCER2P06734 321 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 TRAPPC2P0DI81 140 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 TRAPPC2BP0DI82 140 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 ADMP35318 185 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 TFPI2P48307 235 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 MFAP2P55001 183 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 CATR1Q13166 79 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 OR11H2Q8NH07 326 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 SCARB1Q8WTV0 552 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 NRG4Q8WWG1 115 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 RNF2Q99496 336 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 HINT2Q9BX68 163 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 C21orf62Q9NYP8 219 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 DAPK2Q9UIK4 370 aa12.46□□□□□ -0.41
TOP3B-217ENST00000489581 DEFB4AO15263 64 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 SCGNO76038 276 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 Q56UQ5 140 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 OR1L8Q8NGR8 309 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 MFFQ9GZY8 342 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 AGRNO00468 2067 aa12.45□□□□□ -0.42
TOP3B-217ENST00000489581 IGHV3-49A0A0A0MS15 119 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 C15orf62A8K5M9 175 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 THOC7Q6I9Y2 204 aaKnown RBP12.44□□□□□ -0.42
TOP3B-217ENST00000489581 HSD17B13Q7Z5P4 300 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-217ENST00000489581 TMEM17Q86X19 198 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 LGALS14Q8TCE9 139 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 PLEKHA2Q9HB19 425 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
TOP3B-217ENST00000489581 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
TOP3B-217ENST00000489581 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 DNAH6Q9C0G6 4158 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 K7EIM0 57 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 CHEK1O14757 476 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 FGF2P09038 288 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 TMEM116Q8NCL8 245 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 ATP6V0BQ99437 205 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 RHPN1-AS1Q9BWJ2 59 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 C11orf68Q9H3H3 251 aaKnown RBP12.43□□□□□ -0.42
TOP3B-217ENST00000489581 NDUFA4L2Q9NRX3 87 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 TXNL4BQ9NX01 149 aaKnown RBP12.43□□□□□ -0.42
TOP3B-217ENST00000489581 RHBDL2Q9NX52 303 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 NSG2Q9Y328 171 aa12.43□□□□□ -0.42
TOP3B-217ENST00000489581 RRP15Q9Y3B9 282 aaKnown RBP12.43□□□□□ -0.42
TOP3B-217ENST00000489581 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms