RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 U3KQ87 197 aa8.01□□□□□ -1.13
USP11-211ENST00000489111 CREBBPQ92793 2442 aa8.01□□□□□ -1.13
USP11-211ENST00000489111 C15orf62A8K5M9 175 aa8□□□□□ -1.13
USP11-211ENST00000489111 RGS13O14921 159 aa8□□□□□ -1.13
USP11-211ENST00000489111 DFFBO76075 338 aa8□□□□□ -1.13
USP11-211ENST00000489111 JTBO76095 146 aa8□□□□□ -1.13
USP11-211ENST00000489111 CA2P00918 260 aa8□□□□□ -1.13
USP11-211ENST00000489111 IFNA4P05014 189 aa8□□□□□ -1.13
USP11-211ENST00000489111 HTR2BP41595 481 aa8□□□□□ -1.13
USP11-211ENST00000489111 ERHP84090 104 aaKnown RBP8□□□□□ -1.13
USP11-211ENST00000489111 IFITM2Q01629 132 aa8□□□□□ -1.13
USP11-211ENST00000489111 SLC38A11Q08AI6 406 aa8□□□□□ -1.13
USP11-211ENST00000489111 RPL7L1Q6DKI1 246 aaKnown RBP8□□□□□ -1.13
USP11-211ENST00000489111 SLC25A24Q6NUK1 477 aa8□□□□□ -1.13
USP11-211ENST00000489111 TEX261Q6UWH6 196 aa8□□□□□ -1.13
USP11-211ENST00000489111 TMEM14EPQ6UXP3 125 aa8□□□□□ -1.13
USP11-211ENST00000489111 ZNF767PQ75MW2 155 aa8□□□□□ -1.13
USP11-211ENST00000489111 STPG2Q8N412 459 aa8□□□□□ -1.13
USP11-211ENST00000489111 OR10P1Q8NGE3 313 aa8□□□□□ -1.13
USP11-211ENST00000489111 STOML3Q8TAV4 291 aa8□□□□□ -1.13
USP11-211ENST00000489111 ST8SIA2Q92186 375 aa8□□□□□ -1.13
USP11-211ENST00000489111 PINX1Q96BK5 328 aaKnown RBP8□□□□□ -1.13
USP11-211ENST00000489111 BSCL2Q96G97 398 aaPredicted RBP8□□□□□ -1.13
USP11-211ENST00000489111 ATP5SQ99766 215 aa8□□□□□ -1.13
USP11-211ENST00000489111 RASL11BQ9BPW5 248 aa8□□□□□ -1.13
USP11-211ENST00000489111 MEGF9Q9H1U4 602 aa8□□□□□ -1.13
USP11-211ENST00000489111 BTBD17A6NE02 478 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 FSHBP01225 129 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 IFNA5P01569 189 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 OR13C7P0DN81 318 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 SUB1P53999 127 aaKnown RBP eCLIP7.99□□□□□ -1.13
USP11-211ENST00000489111 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
USP11-211ENST00000489111 AANATQ16613 207 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 FBLN7Q53RD9 439 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
USP11-211ENST00000489111 SPNS3Q6ZMD2 512 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 HSD17B13Q7Z5P4 300 aaPredicted RBP7.99□□□□□ -1.13
USP11-211ENST00000489111 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 ZNF680Q8NEM1 530 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 OR10W1Q8NGF6 305 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 ABHD5Q8WTS1 349 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 SRSF12Q8WXF0 261 aaKnown RBP7.99□□□□□ -1.13
USP11-211ENST00000489111 PHYHIPLQ96FC7 376 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 SSX3Q99909 188 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 SLC25A33Q9BSK2 321 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 TMEM147Q9BVK8 224 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 CYTL1Q9NRR1 136 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 UBQLN2Q9UHD9 624 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 PITPNC1Q9UKF7 332 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 MOB4Q9Y3A3 225 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 ABCA2Q9BZC7 2435 aa7.99□□□□□ -1.13
USP11-211ENST00000489111 ASH1LQ9NR48 2969 aaKnown RBP7.98□□□□□ -1.13
USP11-211ENST00000489111 INS-IGF2F8WCM5 200 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 H3BUX3 64 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 FCN1O00602 326 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 CD5LO43866 347 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 HNF1AP20823 631 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 SRP14P37108 136 aaKnown RBP7.98□□□□□ -1.13
USP11-211ENST00000489111 EXOSC2Q13868 293 aaKnown RBP7.98□□□□□ -1.13
USP11-211ENST00000489111 FXYD3Q14802 87 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 ATP6V1FQ16864 119 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 MRGPRG-AS1Q2M3A8 158 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 ALKAL2Q6UX46 152 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 C9orf139Q6ZV77 190 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 HAPLN4Q86UW8 402 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 TMEM219Q86XT9 240 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 SCGB1C1Q8TD33 95 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 ARPC1AQ92747 370 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 SRSF8Q9BRL6 282 aaKnown RBP7.98□□□□□ -1.13
USP11-211ENST00000489111 WFDC1Q9HC57 220 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 UQCC1Q9NVA1 299 aa7.98□□□□□ -1.13
USP11-211ENST00000489111 SOX21Q9Y651 276 aaPredicted RBP7.98□□□□□ -1.13
USP11-211ENST00000489111 UBE2L5PA0A1B0GUS4 154 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 MDFIC2A0A1B0GVS7 189 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 A0A1B0GW64 132 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 IGLC7A0M8Q6 106 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 SMCO3A2RU48 225 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 CGB1A6NKQ9 187 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 M0QZK8 103 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 CFDP00746 253 aaPredicted RBP7.97□□□□□ -1.13
USP11-211ENST00000489111 HLA-DRB1P01911 266 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 RNASE2P10153 161 aaKnown RBP7.97□□□□□ -1.13
USP11-211ENST00000489111 RAB14P61106 215 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 WT1-ASQ06250 92 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 ARL16Q0P5N6 197 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 LY6EQ16553 131 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 C2orf83Q53S99 150 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 ZNF562Q6V9R5 426 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 Q8N9W7 124 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 HSD17B11Q8NBQ5 300 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 SCARB1Q8WTV0 552 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 SSMEM1Q8WWF3 244 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 C22orf15Q8WYQ4 148 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 RBM14Q96PK6 669 aaKnown RBP7.97□□□□□ -1.13
USP11-211ENST00000489111 YAE1D1Q9NRH1 226 aa7.97□□□□□ -1.13
USP11-211ENST00000489111 ARHGAP32A7KAX9 2087 aa7.96□□□□□ -1.13
USP11-211ENST00000489111 A6NDX4 124 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms