RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 H3BP45 60 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 LY6LH3BQJ8 138 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 IAPPP10997 89 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 TNFRSF9Q07011 255 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 MINOS1Q5TGZ0 78 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 SIGLECL1Q8N7X8 197 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 ABHD14AQ9BUJ0 271 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 PRDM13Q9H4Q3 707 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 DPM3Q9P2X0 92 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 MINOS1-NBL1R4GNA1 71 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 S1PR2O95136 353 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 FBP1P09467 338 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 UBE2KP61086 200 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 HBG1P69891 147 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 HBG2P69892 147 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 DIAPH2-AS1Q14236 149 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 SSX2Q16385 188 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 OR10X1Q8NGY0 326 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 MALSU1Q96EH3 234 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 IFI27L2Q9H2X8 130 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 HILPDAQ9Y5L2 63 aa15.57■□□□□ 0.08
CCM2-216ENST00000488727 ITGB1BP1O14713 200 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 ST8SIA5O15466 376 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 ZNF816Q0VGE8 651 aaPredicted RBP15.56■□□□□ 0.08
CCM2-216ENST00000488727 AKR1C8PQ5T2L2 129 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 SPSB3Q6PJ21 355 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 TMEM14EPQ6UXP3 125 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 HAPLN4Q86UW8 402 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 CD300LFQ8TDQ1 290 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 PSMG3Q9BT73 122 aaPredicted RBP15.56■□□□□ 0.08
CCM2-216ENST00000488727 RBKSQ9H477 322 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.56■□□□□ 0.08
CCM2-216ENST00000488727 AMMECR1Q9Y4X0 333 aaPredicted RBP15.56■□□□□ 0.08
CCM2-216ENST00000488727 RFNGQ9Y644 331 aa15.56■□□□□ 0.08
CCM2-216ENST00000488727 G6PCP35575 357 aa15.55■□□□□ 0.08
CCM2-216ENST00000488727 RUNX1Q01196 453 aa15.55■□□□□ 0.08
CCM2-216ENST00000488727 TPTE2P1Q5T6R2 138 aa15.55■□□□□ 0.08
CCM2-216ENST00000488727 LINC00473A8K010 186 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 METTL15P1P0C7V9 234 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 PPT1P50897 306 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 ARL16Q0P5N6 197 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 Q6YL49 198 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 LYG1Q8N1E2 194 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 ST6GALNAC6Q969X2 333 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 EIF5A2Q9GZV4 153 aaKnown RBP15.54■□□□□ 0.08
CCM2-216ENST00000488727 MEGF9Q9H1U4 602 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 KIAA1456Q9P272 454 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 KRASP01116 189 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 HBE1P02100 147 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 DUTP33316 252 aaKnown RBP15.54■□□□□ 0.08
CCM2-216ENST00000488727 GPR12P47775 334 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 OR2B11Q5JQS5 317 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 SCGB1C1Q8TD33 95 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 ZDHHC16Q969W1 377 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 GAB2Q9UQC2 676 aa15.54■□□□□ 0.08
CCM2-216ENST00000488727 JMJD1CQ15652 2540 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 CEACAM3P40198 252 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 ZNF137PP52743 207 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 LRRC75BQ2VPJ9 315 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 SLC25A24Q6NUK1 477 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 CBLN2Q8IUK8 224 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 RPEQ96AT9 228 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 SLC35B3Q9H1N7 401 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 ESM1Q9NQ30 184 aa15.53■□□□□ 0.08
CCM2-216ENST00000488727 SAA2-SAA4A0A096LPE2 208 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 TRAV1-1A0A0B4J248 108 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 FAM90A9PA6NNJ1 464 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 RBFOX2O43251 390 aaKnown RBP eCLIP15.52■□□□□ 0.085e-6■■■■■ 29.4
CCM2-216ENST00000488727 SAA2P0DJI9 122 aaPredicted RBP15.52■□□□□ 0.08
CCM2-216ENST00000488727 REG1BP48304 166 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 RAB7AP51149 207 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 AARDQ4LEZ3 155 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 SPANXN5Q5MJ07 72 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 TMEM88Q6PEY1 159 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 THNSL2Q86YJ6 484 aa15.52■□□□□ 0.08
CCM2-216ENST00000488727 ZNF418Q8TF45 676 aaPredicted RBP15.52■□□□□ 0.08
CCM2-216ENST00000488727 RBMXL1Q96E39 390 aaKnown RBP15.52■□□□□ 0.08
CCM2-216ENST00000488727 CIB3Q96Q77 187 aaPredicted RBP15.52■□□□□ 0.08
CCM2-216ENST00000488727 HOXA3O43365 443 aaPredicted RBP15.51■□□□□ 0.07
CCM2-216ENST00000488727 IGHV4-59P01825 116 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 IER3P46695 156 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 HILS1P60008 231 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 RBMS3Q6XE24 437 aaKnown RBP15.51■□□□□ 0.07
CCM2-216ENST00000488727 H2BFWTQ7Z2G1 175 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 LILRB2Q8N423 598 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 DUX5Q96PT3 197 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 ZNF251Q9BRH9 671 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 A0A1W2PPI3 338 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 RBFOX3A6NFN3 312 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 PROP1O75360 226 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 IL3RAP26951 378 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 RAB13P51153 203 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 RAB2AP61019 212 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 SERF2P84101 59 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 SLC38A11Q08AI6 406 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 ATP6V1FQ16864 119 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 RPL39P5Q59GN2 51 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 PIFOQ8TCI5 191 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 SSX3Q99909 188 aa15.51■□□□□ 0.07
CCM2-216ENST00000488727 WDR61Q9GZS3 305 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms