RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 WT1-ASQ06250 92 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 MEF2DQ14814 521 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 OR4C16Q8NGL9 310 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 OR13C8Q8NGS7 320 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 MARCH1Q8TCQ1 289 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 TP53RKQ96S44 253 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 TMEM14BQ9NUH8 114 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 H0Y980 276 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 SNAPC5O75971 98 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 DHFRP00374 187 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 AKAIN1P0CW23 69 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 PPP5CP53041 499 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 THOC7Q6I9Y2 204 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 ZFAND1Q8TCF1 268 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 OR4C12Q96R67 309 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
CTDSP1-209ENST00000488627 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 IGLV1-51P01701 117 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 SERPINE2P07093 398 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 P0C879 139 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 OR13C7P0DN81 318 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 DEFA4P12838 97 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 SPNP16150 400 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 HSD17B13Q7Z5P4 300 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 OR5B3Q8NH48 314 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 TSC22D3Q99576 134 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 GPR132Q9UNW8 380 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 S4R3C0 116 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 V9GYH0 126 aa12.16□□□□□ -0.46
CTDSP1-209ENST00000488627 C3orf85A0A1B0GTC6 90 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 MFSD2BA6NFX1 497 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 DISC1C4P0D8 188 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 PPP5D1E7EU14 171 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 IGKV1-5P01602 117 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 IGHV3-23P01764 117 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 CSN3P07498 182 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 MFAP2P55001 183 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 SURF2Q15527 256 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 SP6Q3SY56 376 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 FAM209BQ5JX69 171 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 HAPLN4Q86UW8 402 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 THAP7Q9BT49 309 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 C5orf66Q9H5L9 145 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 SLC2A8Q9NY64 477 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 COPZ2Q9P299 210 aa12.15□□□□□ -0.46
CTDSP1-209ENST00000488627 DNAH9Q9NYC9 4486 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 UCP1P25874 307 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 ZNF79Q15937 498 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 TATDN3Q17R31 274 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 CCDC190Q86UF4 302 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 CCDC71LQ8N9Z2 235 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 TRIM63Q969Q1 353 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
CTDSP1-209ENST00000488627 A0A0B4J293 547 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 OR2C1O95371 312 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 EEF1AKMT3Q96AZ1 226 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 CXorf58Q96LI9 332 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 PRRT1Q99946 306 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 B9D2Q9BPU9 175 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 SORL1Q92673 2214 aa12.13□□□□□ -0.47
CTDSP1-209ENST00000488627 TRBV7-1A0A0A6YYK4 115 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 CLEC3BP05452 202 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 GP9P14770 177 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 GPHB5Q86YW7 130 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
CTDSP1-209ENST00000488627 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms