RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 OR2J3O76001 311 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 NDUFB8O95169 186 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 VAMP1P23763 118 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 PSMB6P28072 239 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 CDX1P47902 265 aaPredicted RBP13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 MFAP2P55001 183 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 OR52B4Q8NGK2 314 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 OR4A16Q8NH70 328 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 DEDD2Q8WXF8 326 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 AIFM2Q9BRQ8 373 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 NDUFA4L2Q9NRX3 87 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 ZFP57Q9NU63 452 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 TMEM14BQ9NUH8 114 aa13.28□□□□□ -0.28
SHROOM1-205ENST00000488072 CENPXA8MT69 81 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 ST8SIA3O43173 380 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 SFT2D2O95562 160 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 TRBV12-3P01733 135 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 IGHV3-23P01764 117 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 TRAPPC2P0DI81 140 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 TRAPPC2BP0DI82 140 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 RAB25P57735 213 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 UBE2MP61081 183 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 OR1L8Q8NGR8 309 aa13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 RNASE11Q8TAA1 199 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 RBPMSQ93062 196 aaKnown RBP13.27□□□□□ -0.29
SHROOM1-205ENST00000488072 IGHV3-21A0A0B4J1V1 117 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 ANKRD34BA5PLL1 514 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 I3L521 148 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 CTRB1P17538 263 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 RHOGP84095 191 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 TMEM128Q5BJH2 165 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 CTRB2Q6GPI1 263 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 PKD1L1Q8TDX9 2849 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 PRNDQ9UKY0 176 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 KCNIP3Q9Y2W7 256 aa13.26□□□□□ -0.29
SHROOM1-205ENST00000488072 IGHV4OR15-8A0A075B7B6 117 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 A0A087WW49 117 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 C9orf170A2RU37 121 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 CCL24O00175 119 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 TCRBP04435 133 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 CRYGCP07315 174 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 SPNP16150 400 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 SLC6A1P30531 599 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 ASAH1Q13510 395 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 C1QL4Q86Z23 238 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 CADM3Q8N126 398 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 OR11H1Q8NG94 326 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 OR4F17Q8NGA8 305 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 C4orf3Q8WVX3 66 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 TMEM68Q96MH6 324 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 OR4F4Q96R69 305 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 P2RX4Q99571 388 aa13.25□□□□□ -0.29
SHROOM1-205ENST00000488072 MGAM2Q2M2H8 2515 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 NPIPB5A8MRT5 1133 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 PF4P02776 101 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 OR4E1P0C645 316 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 SLURP1P55000 103 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 HSPE1P61604 102 aaKnown RBP13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 LINC00482Q8N8I6 264 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 TSC22D3Q99576 134 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 SEC22CQ9BRL7 303 aa13.24□□□□□ -0.29
SHROOM1-205ENST00000488072 TRBV9A0A0B4J1U6 114 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 MPTX1A8MV57 137 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 ADAP1O75689 374 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 B3GALNT1O75752 331 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 HOXB5P09067 269 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 MECP2P51608 486 aaKnown RBP13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 DHRS2Q13268 280 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 LGI3Q8N145 548 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 NUDT15Q9NV35 164 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 FBXL7Q9UJT9 491 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 ZNF257Q9Y2Q1 563 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
SHROOM1-205ENST00000488072 IGLV11-55A0A075B6I3 123 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 FAM240BA0A1B0GVZ2 78 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 H3BUA1 57 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 HLA-AP01891 365 aaKnown RBP13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 IGLL1P15814 213 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 PRCDQ00LT1 54 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 NRARPQ7Z6K4 114 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 OR5B3Q8NH48 314 aa13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 LSM10Q969L4 123 aaKnown RBP13.22□□□□□ -0.29
SHROOM1-205ENST00000488072 A0A0B4J2A0 478 aa13.21□□□□□ -0.29
SHROOM1-205ENST00000488072 C13orf42A0A1B0GVH6 325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms