RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ST3GAL6Q9Y274 331 aa8.73□□□□□ -1.01
TRIM56-204ENST00000487252 DNAH5Q8TE73 4624 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 KBTBD11-OT1A0A1B0GTJ5 212 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ODAMA1E959 279 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 BCL2L11O43521 198 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 NMBP08949 121 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 NFYBP25208 207 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 PSMB6P28072 239 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ARPC4P59998 168 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ZNF146Q15072 292 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 KCTD9Q7L273 389 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 MOB3BQ86TA1 216 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 LINC00596Q86U02 117 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ZNF645Q8N7E2 425 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 LEAP2Q969E1 77 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 SEC22AQ96IW7 307 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 RHOVQ96L33 236 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 C2orf50Q96LR7 162 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 ZNF2Q9BSG1 426 aaPredicted RBP8.72□□□□□ -1.01
TRIM56-204ENST00000487252 RNF126Q9BV68 326 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 C12orf4Q9NQ89 552 aa8.72□□□□□ -1.01
TRIM56-204ENST00000487252 C14orf166Q9Y224 244 aaKnown RBP8.72□□□□□ -1.01
TRIM56-204ENST00000487252 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 NAPSAO96009 420 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 IGHV3-7P01780 117 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 GAPDHP04406 335 aaKnown RBP8.71□□□□□ -1.02
TRIM56-204ENST00000487252 GLAP06280 429 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 PGAM2P15259 253 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 BCL3P20749 454 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 ZP3P21754 424 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 NPBWR2P48146 333 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 CRIP2P52943 208 aaPredicted RBP8.71□□□□□ -1.02
TRIM56-204ENST00000487252 AP2S1P53680 142 aaPredicted RBP8.71□□□□□ -1.02
TRIM56-204ENST00000487252 MPV17LQ2QL34 196 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 COMMD7Q86VX2 200 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 THAP6Q8TBB0 222 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 ST8SIA2Q92186 375 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 GALNT14Q96FL9 552 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 CHMP1AQ9HD42 196 aaPredicted RBP8.71□□□□□ -1.02
TRIM56-204ENST00000487252 RDH8Q9NYR8 311 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 MBD2Q9UBB5 411 aa8.71□□□□□ -1.02
TRIM56-204ENST00000487252 TRBV6-6A0A0A6YYG2 114 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 IGHV7-81A0A0B4J1V7 117 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 TEX13DA0A0J9YY54 714 aaPredicted RBP8.7□□□□□ -1.02
TRIM56-204ENST00000487252 C5orf51A6NDU8 294 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 FAM25EA8MYX2 175 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 H0YIZ8 118 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 SHOXO15266 292 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 IGHV3-11P01762 117 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 HLA-DRB1P01911 266 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 PI3P19957 117 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 AESQ08117 197 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 IL13RA2Q14627 380 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 PRSS54Q6PEW0 395 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 Q6ZWC4 215 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 LRTM2Q8N967 370 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 SLAMF9Q96A28 289 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 MOB3AQ96BX8 217 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 COQ2Q96H96 371 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 GGTLC1Q9BX51 225 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 SLC25A32Q9H2D1 315 aa8.7□□□□□ -1.02
TRIM56-204ENST00000487252 C13orf42A0A1B0GVH6 325 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 ADAP1O75689 374 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 REG1BP48304 166 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 THOC7Q6I9Y2 204 aaKnown RBP8.69□□□□□ -1.02
TRIM56-204ENST00000487252 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 STOML3Q8TAV4 291 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 OR10C1Q96KK4 312 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 RIMS4Q9H426 269 aaPredicted RBP8.69□□□□□ -1.02
TRIM56-204ENST00000487252 NAA60Q9H7X0 242 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 Q9N2K0 584 aa8.69□□□□□ -1.02
TRIM56-204ENST00000487252 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
TRIM56-204ENST00000487252 NPIPB11E5RHQ5 1161 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 SPRY2O43597 315 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 OR7C1O76099 320 aaPredicted RBP8.68□□□□□ -1.02
TRIM56-204ENST00000487252 RLN2P04090 185 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 DUSP1P28562 367 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 FCGR2CP31995 323 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 GLP1RP43220 463 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 TMEM187Q14656 261 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 TOR2AQ5JU69 321 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 SPIN3Q5JUX0 258 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 ZNF880Q6PDB4 577 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 SLC38A6Q8IZM9 456 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 EIF4E3Q8N5X7 224 aaKnown RBP8.68□□□□□ -1.02
TRIM56-204ENST00000487252 TCTEX1D1Q8N7M0 179 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 PCNPQ8WW12 178 aaKnown RBP8.68□□□□□ -1.02
TRIM56-204ENST00000487252 RTN4IP1Q8WWV3 396 aaPredicted RBP8.68□□□□□ -1.02
TRIM56-204ENST00000487252 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
TRIM56-204ENST00000487252 AQP10Q96PS8 301 aa8.68□□□□□ -1.02
TRIM56-204ENST00000487252 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms