RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ZNF585BQ52M93 769 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 ZNF57Q68EA5 555 aaPredicted RBP7.9□□□□□ -1.14
NEK4-204ENST00000487068 C19orf35Q6ZS72 473 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 LILRB2Q8N423 598 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 OR4A16Q8NH70 328 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 MRAPQ8TCY5 172 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 DCUN1D4Q92564 292 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 THAP7Q9BT49 309 aaPredicted RBP7.9□□□□□ -1.14
NEK4-204ENST00000487068 NDUFA13Q9P0J0 144 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 OR51B2Q9Y5P1 312 aa7.9□□□□□ -1.14
NEK4-204ENST00000487068 SORL1Q92673 2214 aa7.9□□□□□ -1.15
NEK4-204ENST00000487068 NPIPB5A8MRT5 1133 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 CYB5BO43169 146 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 LY86O95711 162 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 CTSDP07339 412 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 IL6RP08887 468 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 TRAPPC2P0DI81 140 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 TRAPPC2BP0DI82 140 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 PSMB6P28072 239 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 ATP5G2Q06055 141 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 C15orf32Q32M92 178 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 SP6Q3SY56 376 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 KPRPQ5T749 579 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 TRIQKQ629K1 86 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 THOC7Q6I9Y2 204 aaKnown RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 TTC9CQ8N5M4 171 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 NECAP1Q8NC96 275 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 OR1L8Q8NGR8 309 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 TP53RKQ96S44 253 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 PDCD10Q9BUL8 212 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 RANGRFQ9HD47 186 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 AKIP1Q9NQ31 210 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 AURKAIP1Q9NWT8 199 aaPredicted RBP7.89□□□□□ -1.15
NEK4-204ENST00000487068 FBXL7Q9UJT9 491 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 PRNDQ9UKY0 176 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 V9GYH0 126 aa7.89□□□□□ -1.15
NEK4-204ENST00000487068 C15orf61A6NNL5 157 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 E7EUB6 86 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 IGHV3-23P01764 117 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 HIST1H1BP16401 226 aaKnown RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 ZNF45Q02386 682 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 ZNF79Q15937 498 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 OR10W1Q8NGF6 305 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 DLX4Q92988 240 aaPredicted RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 RRNAD1Q96FB5 475 aaKnown RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 TMEM56Q96MV1 263 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 SCGB3A2Q96PL1 93 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 FKBP11Q9NYL4 201 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 PEF1Q9UBV8 284 aaKnown RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
NEK4-204ENST00000487068 S4R3C0 116 aa7.88□□□□□ -1.15
NEK4-204ENST00000487068 TEX50A0A1B0GTY4 177 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 A0A1B0GW64 132 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 IGLC7A0M8Q6 106 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 TRBV12-3P01733 135 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 FGF2P09038 288 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 OR5AC1P0C628 307 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 OR13C7P0DN81 318 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 AKR1C4P17516 323 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 CTRB1P17538 263 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 PTBP1P26599 531 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEK4-204ENST00000487068 SYNJ2BPP57105 145 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 CTRB2Q6GPI1 263 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 ZNF343Q6P1L6 599 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 HSD17B13Q7Z5P4 300 aaPredicted RBP7.87□□□□□ -1.15
NEK4-204ENST00000487068 TMED4Q7Z7H5 227 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 CCDC190Q86UF4 302 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 SGPP2Q8IWX5 399 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 SLC35G3Q8N808 338 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 OR5B3Q8NH48 314 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 TRIM63Q969Q1 353 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 EEF1AKMT3Q96AZ1 226 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 SEC22AQ96IW7 307 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 OR4C12Q96R67 309 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 ELOVL1Q9BW60 279 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 NAA60Q9H7X0 242 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 SLC2A8Q9NY64 477 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 THYN1Q9P016 225 aa7.87□□□□□ -1.15
NEK4-204ENST00000487068 CGB1A6NKQ9 187 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 B3GALNT1O75752 331 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 BRI3O95415 125 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 IFNA17P01571 189 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 ANXA3P12429 323 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 ARL3P36405 182 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
NEK4-204ENST00000487068 TATDN3Q17R31 274 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 FAM209BQ5JX69 171 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 SLC25A24Q6NUK1 477 aa7.86□□□□□ -1.15
NEK4-204ENST00000487068 GDPD1Q8N9F7 314 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms