RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RNLSQ5VYX0 342 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 TTC23Q5W5X9 447 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 GLT8D1Q68CQ7 371 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 OR10K2Q6IF99 312 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM89BQ8N5H3 189 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 MS4A15Q8N5U1 240 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF383Q8NA42 475 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 SETD6Q8TBK2 473 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 PHYHIPQ92561 330 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 GGHQ92820 318 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 NICN1Q9BSH3 213 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 PLEKHA3Q9HB20 300 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 CHMP1AQ9HD42 196 aaPredicted RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 RETNQ9HD89 108 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 Q9N2K0 584 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 SLC35D1Q9NTN3 355 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 PLEKHJ1Q9NW61 149 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 SMPD3Q9NY59 655 aaPredicted RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 SLC2A8Q9NY64 477 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 OR1A1Q9P1Q5 309 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF221Q9UK13 617 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 PLECQ15149 4684 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 A0A0A6YYD4 124 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 TRBV9A0A0B4J1U6 114 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 IGKV1-6A0A0C4DH72 117 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 PNMA8CA0A1B0GUJ8 204 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 MSGN1A6NI15 193 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM223BA6NKX1 122 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SRRM4A7MD48 611 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 FOXI3A8MTJ6 420 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 OR11H12B2RN74 326 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 TRDCB7Z8K6 153 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 M0R1X1 148 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 LGALS9O00182 355 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SOCS1O15524 211 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 DIRAS3O95661 229 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 CD7P09564 240 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SCTP09683 121 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 OR9G9P0C7N8 305 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 RRASP10301 218 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SRMP19623 302 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 RANBP1P43487 201 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SERPINB10P48595 397 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 TMEM50BP56557 158 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 WNT4P56705 351 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 HLA-DRB3P79483 266 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 ATP5G2Q06055 141 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 CBX3Q13185 183 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 TPBGQ13641 420 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 PRSS8Q16651 343 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 VMA21Q3ZAQ7 101 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 ACSM3Q53FZ2 586 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 LRRTM1Q86UE6 522 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM223AQ8IWN6 122 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 DEFB125Q8N687 156 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 NECAP1Q8NC96 275 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 OR4A4PQ8NGN8 299 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 RRNAD1Q96FB5 475 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 PHB2Q99623 299 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 URM1Q9BTM9 101 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 LPAR5Q9H1C0 372 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SRD5A3Q9H8P0 318 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 S100A14Q9HCY8 104 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 C12orf4Q9NQ89 552 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 ZC4H2Q9NQZ6 224 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 SDHAF2Q9NX18 166 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 COA4Q9NYJ1 87 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 RDH8Q9NYR8 311 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 TECRQ9NZ01 308 aaKnown RBP2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 PSORS1C1Q9UIG5 152 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 AK3Q9UIJ7 227 aa2.93□□□□□ -1.94
SNRNP40-205ENST00000486941 AGRNO00468 2067 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 TRBV6-7A0A0A0MS04 114 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ERICH4A6NGS2 130 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 C2orf70A6NJV1 201 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 SLC17A2O00624 439 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 MYL12BO14950 172 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CREBL2O60519 120 aaPredicted RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 GGCTO75223 188 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 LY6G6CO95867 125 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 CDK1P06493 297 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 UCHL1P09936 223 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 FOLR2P14207 255 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ANXA7P20073 488 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 MAP2K4P45985 399 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 UBE2KP61086 200 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 RPP30P78346 268 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 RHOGP84095 191 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 DEFA5Q01523 94 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF45Q02386 682 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 EXOSC2Q13868 293 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 INSL4Q14641 139 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 GUCA2BQ16661 112 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 RTL8BQ17RB0 113 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 ANKRD55Q3KP44 614 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 HSD17B12Q53GQ0 312 aa2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 RBM48Q5RL73 367 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-205ENST00000486941 LAIR2Q6ISS4 152 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms