RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SPTA1P02549 2419 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 IFITM10A6NMD0 228 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 FNDC10F2Z333 226 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 F6UZH7 168 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 PHOX2AO14813 284 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 CXorf1O96002 111 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 TRGC1P0CF51 173 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ARL14EPLP0DKL9 152 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 MYOD1P15172 320 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ATP5G3P48201 142 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 UBE2G2P60604 165 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 RPL31P62899 125 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 PRCDQ00LT1 54 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ANKRD39Q53RE8 183 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ZNF833PQ6ZTB9 187 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ZCCHC24Q8N2G6 241 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 OR51G1Q8NGK1 321 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 TXNDC17Q9BRA2 123 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 SAP30LQ9HAJ7 183 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 PPP1R14DQ9NXH3 145 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ZNRD1Q9P1U0 126 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 PLCE1Q9P212 2302 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 J3QR06 171 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 IGKV1-16P04430 117 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 S100PP25815 95 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 GALR1P47211 349 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 GNB1P62873 340 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 CST9LP1Q5W188 147 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 SSMEM1Q8WWF3 244 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 OR5B12Q96R08 314 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 HINT2Q9BX68 163 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 SRD5A3Q9H8P0 318 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 PLEKHA3Q9HB20 300 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 NIT2Q9NQR4 276 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 USP24Q9UPU5 2620 aa14.69□□□□□ -0.06
PDLIM7-207ENST00000486828 PPIAL4EA0A075B759 164 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 SRRM4A7MD48 611 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 PPIAL4DF5H284 164 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 TMEM178BH3BS89 294 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 PPIAL4FP0DN26 164 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 RPL29P47914 159 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 RAB31Q13636 194 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 NEUROG1Q92886 237 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 PPIAL4AQ9Y536 164 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 ELOA3CA0A087WX78 387 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 SSTP61278 116 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 STPG3Q8N7X2 389 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 NECAP1Q8NC96 275 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 ZNF714Q96N38 554 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 BET1LQ9NYM9 111 aa14.68□□□□□ -0.06
PDLIM7-207ENST00000486828 NBEAQ8NFP9 2946 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 FCN3O75636 299 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 FKBP11Q9NYL4 201 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 ICE1Q9Y2F5 2266 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 BSNQ9UPA5 3926 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 ATRXP46100 2492 aa14.67□□□□□ -0.06
PDLIM7-207ENST00000486828 TEX50A0A1B0GTY4 177 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 VSTM5A8MXK1 200 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PPP1R2P9O14990 202 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 SAA1P0DJI8 122 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 CCL3L1P16619 93 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 EFNB3Q15768 340 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 TMEM200BQ69YZ2 307 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 OSR1Q8TAX0 266 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 RND1Q92730 232 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 MRPL20Q9BYC9 149 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 GAR1Q9NY12 217 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 EPG5Q9HCE0 2579 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 NDUFB4O95168 129 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 S100A2P29034 98 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 ATP5IP56385 69 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 RHOBP62745 196 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PRR20EP86478 221 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PRR20CP86479 221 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PRR20DP86480 221 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PRR20BP86481 221 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 PRR20AP86496 221 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 LINC01551Q86U37 167 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 OR5B3Q8NH48 314 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 ELOVL1Q9BW60 279 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 TMEM106BQ9NUM4 274 aa14.66□□□□□ -0.06
PDLIM7-207ENST00000486828 TNFRSF13BO14836 293 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 APOA2P02652 100 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 IGFBP2P18065 325 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 C4orf17Q53FE4 359 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 HIST3H2BBQ8N257 126 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 CCL17Q92583 94 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 OR51M1Q9H341 326 aa14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 SEPSECSQ9HD40 501 aaKnown RBP14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 YLPM1P49750 1951 aaKnown RBP14.65□□□□□ -0.06
PDLIM7-207ENST00000486828 H0YJW9 148 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 FABP1P07148 127 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 SOD3P08294 240 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 FAM87AP0C7U9 286 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 CD99P14209 185 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 GCHFRP30047 84 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 SRP14P37108 136 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 C2orf83Q53S99 150 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 OR5AN1Q8NGI8 311 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 OR4X1Q8NH49 305 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms