RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 SCNM1Q9BWG6 230 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 CSN3P07498 182 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 HELTA6NFD8 242 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 RRHO14718 337 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 FRMD6-AS1P0C7T7 363 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 USF1P22415 310 aaPredicted RBP10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 NRN1Q9NPD7 142 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 HBZP02008 142 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 MPV17P39210 176 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 GFRA1P56159 465 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 RPL30P62888 115 aaKnown RBP10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 LCN2P80188 198 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 KRTCAP3Q53RY4 240 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 FDCSPQ8NFU4 85 aa10.33□□□□□ -0.76
SHROOM3-208ENST00000486758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 ETV2O00321 342 aaPredicted RBP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 CGAP01215 116 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 MFAP2P55001 183 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 PCSK4Q6UW60 755 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 SNAI2O43623 268 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 GPR6P46095 362 aaPredicted RBP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 RELBQ01201 579 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 KLF14Q8TD94 323 aaPredicted RBP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 PARD6GQ9BYG4 376 aaPredicted RBP10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
SHROOM3-208ENST00000486758 DPRXA6NFQ7 191 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 TNFSF13O75888 250 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 APELAP0DMC3 54 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF137PP52743 207 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF585BQ52M93 769 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 MOGAT3Q86VF5 341 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ELOVL5Q9NYP7 299 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 PROCRQ9UNN8 238 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 DOPEY2Q9Y3R5 2298 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 RAB29O14966 203 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 PLAUP00749 431 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 TIMP3P35625 211 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 PSG7Q13046 419 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF738Q8NE65 137 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 Q8NFD4 153 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 GNB4Q9HAV0 340 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 VENTXO95231 258 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 SPATA31B1PQ5VZV4 182 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNRF1Q8ND25 227 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 C22orf15Q8WYQ4 148 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 S1PR3Q99500 378 aa10.31□□□□□ -0.76
SHROOM3-208ENST00000486758 NPPCP23582 126 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 SMIM21Q3B7S5 101 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 CENPWQ5EE01 88 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 PPP1R35Q8TAP8 253 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 IL36GQ9NZH8 169 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 CXorf1O96002 111 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 RHOBP62745 196 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 RND1Q92730 232 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 TAAR6Q96RI8 345 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 PMCHL2Q9BQD1 86 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 SPRR3Q9UBC9 169 aa10.3□□□□□ -0.76
SHROOM3-208ENST00000486758 DKK1O94907 266 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 IGLV3-1P01715 115 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 BLNKQ8WV28 456 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 SARAFQ96BY9 339 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 MCRIP2Q9BUT9 160 aaKnown RBP10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 ASCL3Q9NQ33 180 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 PLXNB1O43157 2135 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 TMEM210A6NLX4 147 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 C12orf77C9JDV5 145 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 CLDN14O95500 239 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 APCSP02743 223 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 STPG4Q8N801 248 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF71Q9NQZ8 489 aaPredicted RBP10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 C21orf140B9A014 251 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 PSPNO60542 156 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 SMPD2O60906 423 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 WISP2O76076 250 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 REG1BP48304 166 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 TMEM42Q69YG0 159 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 RNF2Q99496 336 aa10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 FGF23Q9GZV9 251 aaPredicted RBP10.29□□□□□ -0.76
SHROOM3-208ENST00000486758 FOXH1O75593 365 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms