RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
HMGN1-216ENST00000486741 LINC00869P0C866 280 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 CD24P25063 80 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 PKIAP61925 76 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 TBR1Q16650 682 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 CXorf1O96002 111 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-216ENST00000486741 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
HMGN1-216ENST00000486741 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 PNKDQ8N490 385 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 GATAD1Q8WUU5 269 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 ATG101Q9BSB4 218 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 PARLQ9H300 379 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-216ENST00000486741 ARL16Q0P5N6 197 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 DPPA3Q6W0C5 159 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 OR10G8Q8NGN5 311 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 NPIPB3Q92617 1050 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
HMGN1-216ENST00000486741 S4R3C0 116 aa10.99□□□□□ -0.65
HMGN1-216ENST00000486741 ADCYAP1P18509 176 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 CAMPP49913 170 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 DHRS7BQ6IAN0 325 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-216ENST00000486741 TMUB1Q9BVT8 246 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 NAT8BQ9UHF3 227 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 WASHC3Q9Y3C0 194 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 TIMM9Q9Y5J7 89 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 LAMA1P25391 3075 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 C20orf202A1L168 122 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 MBNL2Q5VZF2 373 aaKnown RBP10.98□□□□□ -0.65
HMGN1-216ENST00000486741 NHLRC2Q8NBF2 726 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 SGMS2Q8NHU3 365 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 LOC102723971A0A1B0GUV8 181 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 HELTA6NFD8 242 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 DPRXA6NFQ7 191 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 IGFBP2P18065 325 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-216ENST00000486741 STPG3Q8N7X2 389 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 GGACTQ9BVM4 153 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 FCN1O00602 326 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 AUP1Q9Y679 476 aa10.98□□□□□ -0.65
HMGN1-216ENST00000486741 YPEL1O60688 119 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 CEACAM3P40198 252 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 C10orf113Q5VZT2 155 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
HMGN1-216ENST00000486741 KDF1Q8NAX2 398 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-216ENST00000486741 OR4C13Q8NGP0 309 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 YPEL2Q96QA6 119 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 PSMG3Q9BT73 122 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-216ENST00000486741 SMDT1Q9H4I9 107 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 MST1LQ2TV78 715 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 CLDND2Q8NHS1 167 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 RNASE6Q93091 150 aaKnown RBP10.97□□□□□ -0.65
HMGN1-216ENST00000486741 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 PRSS33Q8NF86 280 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 AMMECR1Q9Y4X0 333 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-216ENST00000486741 EYSQ5T1H1 3165 aa10.97□□□□□ -0.65
HMGN1-216ENST00000486741 TNCP24821 2201 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 B9A039 149 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 HSBP1L1C9JCN9 74 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 MOSP00540 346 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-216ENST00000486741 DLX1P56177 255 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 KLRB1Q12918 225 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 IQCJQ1A5X6 159 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 RBM14Q96PK6 669 aaKnown RBP10.96□□□□□ -0.65
HMGN1-216ENST00000486741 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 DMRT1Q9Y5R6 373 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 ATP5G3P48201 142 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 ICAM4Q14773 271 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 OR10W1Q8NGF6 305 aa10.96□□□□□ -0.65
HMGN1-216ENST00000486741 KRTDAPP60985 99 aa10.96□□□□□ -0.66
HMGN1-216ENST00000486741 FAM222BQ8WU58 562 aa10.96□□□□□ -0.66
HMGN1-216ENST00000486741 NABP2Q9BQ15 211 aa10.96□□□□□ -0.66
HMGN1-216ENST00000486741 ARHGAP21Q5T5U3 1957 aa10.96□□□□□ -0.66
HMGN1-216ENST00000486741 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 B4DEV8 164 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 GNG7O60262 68 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CD5P06127 495 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 SAA1P0DJI8 122 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-216ENST00000486741 TCF15Q12870 199 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 SRSF7Q16629 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGN1-216ENST00000486741 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 PDPNQ86YL7 162 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 FBXL15Q9H469 300 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 COA4Q9NYJ1 87 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms