RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RORCP51449 518 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 RPL8P62917 257 aaKnown RBP5.42□□□□□ -1.54
HDAC3-209ENST00000486618 ST3GAL4Q11206 333 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 EIF2B1Q14232 305 aaKnown RBP5.42□□□□□ -1.54
HDAC3-209ENST00000486618 IZUMO4Q1ZYL8 232 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 SPSB3Q6PJ21 355 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4L9Q6RFH8 374 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-209ENST00000486618 GSG1LQ6UXU4 331 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 RASSF6Q6ZTQ3 369 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 LYG1Q8N1E2 194 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 CBR4Q8N4T8 237 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 ADAD2Q8NCV1 583 aaKnown RBP5.42□□□□□ -1.54
HDAC3-209ENST00000486618 LY6G5BQ8NDX9 201 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 WFDC9Q8NEX5 89 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 CNIH3Q8TBE1 160 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 ARL11Q969Q4 196 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 MARVELD1Q9BSK0 173 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 FAAP24Q9BTP7 215 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 NPFFR1Q9GZQ6 430 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 ACOT13Q9NPJ3 140 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 DUX4Q9UBX2 424 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 WSB1Q9Y6I7 421 aa5.42□□□□□ -1.54
HDAC3-209ENST00000486618 BBIP1A8MTZ0 92 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 H7C1C5 153 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 RER1O15258 196 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 NDUFB3O43676 98 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 TRIAP1O43715 76 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF682O95780 498 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 RENP00797 406 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 APOA2P02652 100 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 MBPP02686 304 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 FOLR2P14207 255 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 IGLL1P15814 213 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 CTLA4P16410 223 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 IGFBP3P17936 291 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 TBPP20226 339 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 CA6P23280 308 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 HRH1P35367 487 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 OR1E2P47887 323 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 UBE2E1P51965 193 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 XGP55808 180 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF121P58317 390 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 SUMO2P61956 95 aaKnown RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 LCN6P62502 163 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 DGCR2P98153 550 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 CDK5Q00535 292 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 UNC119Q13432 240 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 PPP1R1AQ13522 171 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 LY6EQ16553 131 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 CYBRD1Q53TN4 286 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 TEX36Q5VZQ5 186 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 TBPL2Q6SJ96 375 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 TSEN54Q7Z6J9 526 aaKnown RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 GATD1Q8NB37 220 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 OR2T12Q8NG77 320 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 OR1S2Q8NGQ3 325 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 OR4X1Q8NH49 305 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 PITX2Q99697 317 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 NKX3-1Q99801 234 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 HSPB9Q9BQS6 159 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 CABLES2Q9BTV7 478 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 ADAT1Q9BUB4 502 aaKnown RBP5.41□□□□□ -1.54
HDAC3-209ENST00000486618 MS4A6AQ9H2W1 248 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 OR51J1Q9H342 316 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 MED9Q9NWA0 146 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF319Q9P2F9 582 aa5.41□□□□□ -1.54
HDAC3-209ENST00000486618 COL7A1Q02388 2944 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 TRAV27A0A087WT01 109 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 A0A1W2PRE2 83 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 GGT3PA6NGU5 568 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CD300LBA8K4G0 201 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 F5H5K5 113 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 M0R1W7 72 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CORTO00230 105 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF780AO75290 641 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 NDUFB2O95178 105 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 DUS4LO95620 317 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 PPP1R3DO95685 299 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 LHBP01229 141 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 GCGP01275 180 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CD14P08571 375 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CD28P10747 220 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 PSG1P11464 419 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 ZNF823P16415 610 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 DUTP33316 252 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 SMIM11AP58511 58 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 SELENOWP63302 87 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 KLRD1Q13241 179 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 GPR50Q13585 617 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 KLF5Q13887 457 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 GUCA2BQ16661 112 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 LRRC10Q5BKY1 277 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 NANOGP8Q6NSW7 305 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 BCDIN3DQ7Z5W3 292 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 ARPINQ7Z6K5 226 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms