RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TMEM167AQ8TBQ9 72 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 MGST2Q99735 147 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 LSM4Q9Y4Z0 139 aaKnown RBP16.51■□□□□ 0.23
HPS3-206ENST00000486530 TNCP24821 2201 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 SEC14L6B5MCN3 397 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 AKR1C3P42330 323 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 WDR25Q64LD2 544 aaPredicted RBP16.5■□□□□ 0.23
HPS3-206ENST00000486530 DTX2Q86UW9 622 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 RAB24Q969Q5 203 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 NIPSNAP3BQ9BS92 247 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 GGTLC1Q9BX51 225 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 COMMD5Q9GZQ3 224 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 TUBA4BQ9H853 241 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 OPN1MWP04001 364 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 OPN1MW2P0DN77 364 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 OPN1MW3P0DN78 364 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 HLA-DRB5Q30154 266 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 ARSJQ5FYB0 599 aaPredicted RBP16.5■□□□□ 0.23
HPS3-206ENST00000486530 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 MANBALQ9NQG1 85 aa16.5■□□□□ 0.23
HPS3-206ENST00000486530 MALRD1Q5VYJ5 2156 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 hCG_1809904A0A1W2PP81 198 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 A0A1W2PPE2 198 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 A0A1W2PR64 198 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 A0A1W2PRV1 198 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 IGLV1-47P01700 117 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 BSXQ3C1V8 233 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 C2orf83Q53S99 150 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 TEPPQ6URK8 271 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 BEND2Q8NDZ0 799 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 OR1L8Q8NGR8 309 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 NDUFA4L2Q9NRX3 87 aa16.49■□□□□ 0.23
HPS3-206ENST00000486530 IGSF10Q6WRI0 2623 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 INS-IGF2F8WCM5 200 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 HMGB3O15347 200 aaKnown RBP16.48■□□□□ 0.23
HPS3-206ENST00000486530 EIF3GO75821 320 aaKnown RBP eCLIP16.48■□□□□ 0.23
HPS3-206ENST00000486530 IGLV2-23P01705 113 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 VMA21Q3ZAQ7 101 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 FAM90A2PQ658T7 463 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 SLC35E3Q7Z769 313 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 PXMP4Q9Y6I8 212 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 COLCA2A8K830 154 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 C19orf84I3L1E1 186 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 NDUFS6O75380 124 aaKnown RBP16.48■□□□□ 0.23
HPS3-206ENST00000486530 LY6HO94772 140 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 PSMB3P49720 205 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 RAB31Q13636 194 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 TVP23CQ96ET8 276 aa16.48■□□□□ 0.23
HPS3-206ENST00000486530 A0A1W2PN81 502 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 YIF1AO95070 293 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 LIPFP07098 398 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 CHRNA7P36544 502 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 LGALS7P47929 136 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 MEF2BQ02080 365 aaPredicted RBP16.47■□□□□ 0.23
HPS3-206ENST00000486530 TMEM249Q2WGJ8 235 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 LY6G5BQ8NDX9 201 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 C1orf159Q96HA4 380 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 CHODLQ9H9P2 273 aa16.47■□□□□ 0.23
HPS3-206ENST00000486530 AMMECR1Q9Y4X0 333 aaPredicted RBP16.47■□□□□ 0.23
HPS3-206ENST00000486530 RNASE2P10153 161 aaKnown RBP16.46■□□□□ 0.23
HPS3-206ENST00000486530 TMPRSS5Q9H3S3 457 aa16.46■□□□□ 0.23
HPS3-206ENST00000486530 A0A1W2PPR1 153 aa16.46■□□□□ 0.22
HPS3-206ENST00000486530 A0A1W2PPV4 95 aa16.46■□□□□ 0.22
HPS3-206ENST00000486530 BUB1B-PAK6H3BSN5 160 aa16.46■□□□□ 0.22
HPS3-206ENST00000486530 ERHP84090 104 aaKnown RBP16.46■□□□□ 0.22
HPS3-206ENST00000486530 MIC13Q5XKP0 118 aa16.46■□□□□ 0.22
HPS3-206ENST00000486530 EPG5Q9HCE0 2579 aa16.45■□□□□ 0.22
HPS3-206ENST00000486530 B2MP61769 119 aa16.45■□□□□ 0.22
HPS3-206ENST00000486530 FLI1Q01543 452 aaPredicted RBP16.45■□□□□ 0.22
HPS3-206ENST00000486530 GCSAMLQ5JQS6 135 aa16.45■□□□□ 0.22
HPS3-206ENST00000486530 CFAP46Q8IYW2 2715 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 A0A087WWC5 75 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 DEFA4P12838 97 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 IGFBP2P18065 325 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 RPL29P47914 159 aaKnown RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 CD81P60033 236 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 PNRC1Q12796 327 aaPredicted RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 OR10W1Q8NGF6 305 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 ZNF430Q9H8G1 570 aaPredicted RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 PATZ1Q9HBE1 687 aaKnown RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 ONECUT1Q9UBC0 465 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 SPTBN1Q01082 2364 aaKnown RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 C22orf46C9J442 243 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 ENSAO43768 121 aaKnown RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 SLC25A17O43808 307 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 TMEM144Q7Z5S9 345 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 IQCF2Q8IXL9 164 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 MLXQ9UH92 298 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 INSIG2Q9Y5U4 225 aa16.44■□□□□ 0.22
HPS3-206ENST00000486530 HRNRQ86YZ3 2850 aaPredicted RBP16.44■□□□□ 0.22
HPS3-206ENST00000486530 IGHV1-3A0A0C4DH29 117 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 TMEM250H0YL14 139 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 MT-ND4LP03901 98 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 COX7A1P24310 79 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 DLX1P56177 255 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 ZNF843Q8N446 348 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 STPG3Q8N7X2 389 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 TEX45Q8NA69 505 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 OR4P4Q8NGL7 312 aa16.43■□□□□ 0.22
HPS3-206ENST00000486530 SSMEM1Q8WWF3 244 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms