RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 CIB3Q96Q77 187 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 GPHA2Q96T91 129 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 S1PR3Q99500 378 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 CACNG5Q9UF02 275 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 FBXL17Q9UF56 701 aa7.49□□□□□ -1.21
TMEM39A-208ENST00000486159 EPPK1P58107 5090 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A087X0M5 115 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1B0GX30 115 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 SH2D7A6NKC9 451 aaPredicted RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 C17orf98A8MV24 154 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 ODF3BA8MYP8 253 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 M0R1X1 148 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 SSSCA1O60232 199 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 SEC11BP0C7V7 166 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 CAV2P51636 162 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 LGALS4P56470 323 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 ERVK-16P61578 105 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 RPL30P62888 115 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 EWSR1Q01844 656 aaKnown RBP eCLIP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 CT45A1Q5HYN5 189 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 HSD17B13Q7Z5P4 300 aaPredicted RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 STPG2Q8N412 459 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 TMEM252Q8N6L7 170 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 OR4C13Q8NGP0 309 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 CT45A3Q8NHU0 189 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 DNAH3Q8TD57 4116 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 WIPF2Q8TF74 440 aaPredicted RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 C5orf30Q96GV9 206 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 CITED2Q99967 270 aaPredicted RBP7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 HILPDAQ9Y5L2 63 aa7.48□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A0G2JRQ6 117 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1W2PR64 198 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 S1PR2O95136 353 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 HRASP01112 189 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 NQO2P16083 231 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 SULT1A1P50225 295 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 SULT1A2P50226 295 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 ZNF134P52741 427 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 HBG1P69891 147 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 HBG2P69892 147 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 POU2AF1Q16633 256 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 LTC4SQ16873 150 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 KPRPQ5T749 579 aaPredicted RBP7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 RPL7L1Q6DKI1 246 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 C10orf99Q6UWK7 81 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 OR1S2Q8NGQ3 325 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 OR52E5Q8NH55 327 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 DDB2Q92466 427 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 R3HDM4Q96D70 268 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 GNPNAT1Q96EK6 184 aaPredicted RBP7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 TCF19Q9Y242 345 aa7.47□□□□□ -1.21
TMEM39A-208ENST00000486159 A0A1W2PRX2 142 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 IGSF23A1L1A6 192 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 MFSD2BA6NFX1 497 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 FAM24AA6NFZ4 105 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 MARCH11A6NNE9 402 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 LINC00473A8K010 186 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 UMAD1C9J7I0 102 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 TEX46H3BTG2 121 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 TXNL1O43396 289 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 RAMP3O60896 148 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 FCGR3BO75015 233 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 PROP1O75360 226 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 FBXO24O75426 580 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 KRASP01116 189 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 IGHV1-8P0DP01 117 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 NFYBP25208 207 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 IL3RAP26951 378 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 G6PCP35575 357 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF137PP52743 207 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 PAX9P55771 341 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 BRWD1-AS2P59051 145 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 UBE2KP61086 200 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 RPP30P78346 268 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF816Q0VGE8 651 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 RTL8BQ17RB0 113 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 TCTEX1D4Q5JR98 221 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 PRAMEF5Q5TYX0 476 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 UQCC3Q6UW78 93 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 Q6ZRM9 215 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 ZNF833PQ6ZTB9 187 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 CLCC1Q96S66 551 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 TSNAXQ99598 290 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 PARD6GQ9BYG4 376 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 NPFFR1Q9GZQ6 430 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 MAGT1Q9H0U3 335 aa7.46□□□□□ -1.22
TMEM39A-208ENST00000486159 PSENENQ9NZ42 101 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms