RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 TEX22C9J3V5 150 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 APELAP0DMC3 54 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 AP2S1P53680 142 aaPredicted RBP11.52□□□□□ -0.57
LRIF1-202ENST00000485275 WT1-ASQ06250 92 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 C19orf35Q6ZS72 473 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 SIGLECL1Q8N7X8 197 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
LRIF1-202ENST00000485275 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 TMEM160Q9NX00 188 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 WSB1Q9Y6I7 421 aa11.52□□□□□ -0.57
LRIF1-202ENST00000485275 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HOXA3O43365 443 aaPredicted RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 RLN2P04090 185 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 P2RY1P47900 373 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 CAV2P51636 162 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 TMEM267Q0VDI3 215 aaPredicted RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 OR2C3Q8N628 320 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 OR8H1Q8NGG4 311 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 TNFRSF19Q9NS68 423 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HIVEP2P31629 2446 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 LINC01548A6NM66 108 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 AREGP15514 252 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 RPL27AP46776 148 aaKnown RBP11.51□□□□□ -0.57
LRIF1-202ENST00000485275 CX3CL1P78423 397 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 Q6ZS46 218 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 TMEM252Q8N6L7 170 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 PLEKHA3Q9HB20 300 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 FKBP11Q9NYL4 201 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 HSPB11Q9Y547 144 aa11.51□□□□□ -0.57
LRIF1-202ENST00000485275 L7N2F9 121 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 MED6O75586 246 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 EGR2P11161 476 aaPredicted RBP11.5□□□□□ -0.57
LRIF1-202ENST00000485275 RPL12P30050 165 aaKnown RBP11.5□□□□□ -0.57
LRIF1-202ENST00000485275 MAS1LP35410 378 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 VAMP2P63027 116 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.57
LRIF1-202ENST00000485275 NHLH2Q02577 135 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 ZNF345Q14585 488 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 C1RLQ9NZP8 487 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 F8P00451 2351 aa11.5□□□□□ -0.57
LRIF1-202ENST00000485275 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 FGF16O43320 207 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 TSC22D2O75157 780 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 CST7O76096 145 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 REG1AP05451 166 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 FOSL1P15407 271 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 PVALBP20472 110 aaPredicted RBP11.49□□□□□ -0.57
LRIF1-202ENST00000485275 TAS2R30P59541 319 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 FXYD3Q14802 87 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 TMEM14EPQ6UXP3 125 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 ZNF562Q6V9R5 426 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
LRIF1-202ENST00000485275 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 ACTL6BO94805 426 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 METTL15P1P0C7V9 234 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 BLCAPP62952 87 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 KCNRGQ8N5I3 272 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 SSMEM1Q8WWF3 244 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 RASL11BQ9BPW5 248 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
LRIF1-202ENST00000485275 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
LRIF1-202ENST00000485275 INS-IGF2F8WCM5 200 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 GPR137BO60478 399 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 RPL23AP62750 156 aaKnown RBP11.48□□□□□ -0.57
LRIF1-202ENST00000485275 OR2F1Q13607 317 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 TMUB2Q71RG4 321 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 INO80EQ8NBZ0 244 aaPredicted RBP11.48□□□□□ -0.57
LRIF1-202ENST00000485275 ARPC1AQ92747 370 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 CIB3Q96Q77 187 aaPredicted RBP11.48□□□□□ -0.57
LRIF1-202ENST00000485275 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
LRIF1-202ENST00000485275 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 ATP6V0E1O15342 81 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 CNIH1O95406 144 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 RNASE2P10153 161 aaKnown RBP11.47□□□□□ -0.57
LRIF1-202ENST00000485275 HNF1AP20823 631 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 MFAP2P55001 183 aa11.47□□□□□ -0.57
LRIF1-202ENST00000485275 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms