RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KBTBD11-OT1A0A1B0GTJ5 212 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 NKX6-3A6NJ46 265 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 ZNF729A6NN14 1252 aaPredicted RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 VWC2LB2RUY7 222 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 B4DEV8 164 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 AGPAT2O15120 278 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 MPDU1O75352 247 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 FOLR2P14207 255 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 NQO2P16083 231 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 CTRB1P17538 263 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 DUTP33316 252 aaKnown RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 PPP1CCP36873 323 aaKnown RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 THBS3P49746 956 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 SPCS3P61009 180 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 MEF2CQ06413 473 aaPredicted RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 SLC38A11Q08AI6 406 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 TEX36Q5VZQ5 186 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 CTRB2Q6GPI1 263 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 SSX9Q7RTT3 188 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 ASCL5Q7RTU5 278 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 ZNF525Q8N782 197 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 ZNF709Q8N972 641 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 OR4S2Q8NH73 311 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 DUX5Q96PT3 197 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 S1PR3Q99500 378 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 SCRT1Q9BWW7 348 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 WDR61Q9GZS3 305 aaKnown RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 RBKSQ9H477 322 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 Q9H8V8 135 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 CLN8Q9UBY8 286 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 MLXQ9UH92 298 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 PSG11Q9UQ72 335 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 VPS13AQ96RL7 3174 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 DMDP11532 3685 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 SPEGQ15772 3267 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 ARID1AO14497 2285 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 CNOT1A5YKK6 2376 aaKnown RBP6.3□□□□□ -1.4
SNX13-208ENST00000482558 A0A087WWC5 75 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 TRAV39A0A0B4J263 110 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 TRAV38-1A0A0B4J264 116 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 hADV38S2A0JD32 116 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 FAM74A7A6NL05 159 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 NDUFA2O43678 99 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 ZG16O60844 167 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 RBMXL2O75526 392 aaKnown RBP6.3□□□□□ -1.4
SNX13-208ENST00000482558 WISP2O76076 250 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 NDUFA7O95182 113 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 KRASP01116 189 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 MT-ND4LP03901 98 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 CGB3P0DN86 165 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 CGB7P0DN87 165 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 TDGF1P3P51864 188 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 CD81P60033 236 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 PNRC1Q12796 327 aaPredicted RBP6.3□□□□□ -1.4
SNX13-208ENST00000482558 FAM74A3Q4VXF1 159 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 AVPI1Q5T686 147 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 STUMQ69YW2 141 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 C5orf24Q7Z6I8 188 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 SLC35E3Q7Z769 313 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 ZNF429Q86V71 674 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 DOLPP1Q86YN1 238 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 ODF3L1Q8IXM7 274 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 ITLN1Q8WWA0 313 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 TAF15Q92804 592 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNX13-208ENST00000482558 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 GAL3ST2Q9H3Q3 398 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 SIRT7Q9NRC8 400 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 CALYQ9NYX4 217 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 FZR1Q9UM11 496 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 RPH3ALQ9UNE2 315 aa6.3□□□□□ -1.4
SNX13-208ENST00000482558 TRGV8A0A0C4DH27 118 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 C17orf98A8MV24 154 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 ATP6V1G2-DDX39BF2Z307 99 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 K7ENP7 123 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 M0R036 132 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 SIGLEC5O15389 551 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 SPRY3O43610 288 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 S1PR2O95136 353 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 HRASP01112 189 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 IGHV1-46P01743 117 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 IAPPP10997 89 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 NDUFB7P17568 137 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 SSTR5P35346 364 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 G6PCP35575 357 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 EDDM3BP56851 147 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 RAB5BP61020 215 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 RPL30P62888 115 aaKnown RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 TMEM267Q0VDI3 215 aaPredicted RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 EDDM3AQ14507 147 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 TMEM249Q2WGJ8 235 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms