RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 UBFD1O14562 309 aaKnown RBP3.02□□□□□ -1.93
VPS41-212ENST00000482217 MRPS14O60783 128 aaKnown RBP3.02□□□□□ -1.93
VPS41-212ENST00000482217 IGHV3-48P01763 117 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 HLA-DQB1P01920 261 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 APODP05090 189 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 PAEPP09466 180 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 HLA-EP13747 358 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 TAS2R19P59542 299 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 UBE2NP61088 152 aaKnown RBP3.02□□□□□ -1.93
VPS41-212ENST00000482217 ADIGQ0VDE8 80 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 RTL8BQ17RB0 113 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 VMA21Q3ZAQ7 101 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 MEIG1Q5JSS6 88 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 EBLN2Q6P2I7 272 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 Q6ZS49 121 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 PRR15Q8IV56 129 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 RNF175Q8N4F7 328 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 C3orf22Q8N5N4 141 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 TMEM252Q8N6L7 170 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 PACRGLQ8N7B6 248 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 FER1L6-AS1Q8NA97 138 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 C5orf17Q8NAS9 161 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 CSNK1G2-AS1Q8NCQ2 148 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 OR5A2Q8NGI9 324 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 OR51H1Q8NH63 302 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 FRZBQ92765 325 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 OR4C12Q96R67 309 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 RTL8AQ9BWD3 113 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 TSSK6Q9BXA6 273 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 COMMD5Q9GZQ3 224 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 MED28Q9H204 178 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 PARLQ9H300 379 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 FAM49BQ9NUQ9 324 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 MDFICQ9P1T7 246 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 RNF11Q9Y3C5 154 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 ADGRL2O95490 1459 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 IFT140Q96RY7 1462 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 ATRNO75882 1429 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 RAI1Q7Z5J4 1906 aaPredicted RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 ANKRD36BQ8N2N9 1353 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 IGHV3-16A0A0C4DH30 117 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 IGHV1-69-2A0A0G2JMI3 117 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 SMIM31A0A1B0GVY4 71 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 C9JQL5 133 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 NDUFC2-KCTD14E9PQ53 114 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 J3QR89 54 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 J3QRK9 145 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 GSTZ1O43708 216 aaPredicted RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 DEDDO75618 318 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 LYZL6O75951 148 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CD2P06729 351 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CHTF8P0CG12 524 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 GZMBP10144 247 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CRISP2P16562 243 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 OR10J1P30954 320 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 FOXA1P55317 472 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CRADDP78560 199 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CYCSP99999 105 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 EGFEM1PQ0D2K5 195 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 TMEM241Q24JQ0 296 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 LINC00303Q3SY05 128 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 MRPL2Q5T653 305 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 RPL22L1Q6P5R6 122 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 LRP11Q86VZ4 500 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 ZNF440Q8IYI8 595 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 OR4K5Q8NGD3 323 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 ZNF519Q8TB69 540 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 MAGOHBQ96A72 148 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 TEX37Q96LM6 180 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CCL13Q99616 98 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 ZNF471Q9BX82 626 aaPredicted RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 C1QTNF6Q9BXI9 259 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 WDR61Q9GZS3 305 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 SCRT2Q9NQ03 307 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CBLN4Q9NTU7 201 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 TAAR3PQ9P1P4 343 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CACNG5Q9UF02 275 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 KLK13Q9UKR3 277 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 FIS1Q9Y3D6 152 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 SOX21Q9Y651 276 aaPredicted RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 LRRIQ1Q96JM4 1722 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 MYOM2P54296 1465 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 NEO1Q92859 1461 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 MYH13Q9UKX3 1938 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 PLXNB3Q9ULL4 1909 aa3.01□□□□□ -1.93
VPS41-212ENST00000482217 CPSF1Q10570 1443 aaKnown RBP3.01□□□□□ -1.93
VPS41-212ENST00000482217 FRMPD1Q5SYB0 1578 aa3□□□□□ -1.93
VPS41-212ENST00000482217 PCNX3Q9H6A9 2034 aa3□□□□□ -1.93
VPS41-212ENST00000482217 TICRRQ7Z2Z1 1910 aa3□□□□□ -1.93
VPS41-212ENST00000482217 ANAPC1Q9H1A4 1944 aa3□□□□□ -1.93
VPS41-212ENST00000482217 C7orf71A4D174 169 aa3□□□□□ -1.93
VPS41-212ENST00000482217 DPRXA6NFQ7 191 aa3□□□□□ -1.93
VPS41-212ENST00000482217 A8MXK9 166 aa3□□□□□ -1.93
VPS41-212ENST00000482217 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
VPS41-212ENST00000482217 B4DEV8 164 aa3□□□□□ -1.93
VPS41-212ENST00000482217 KRBOX1C9JBD0 128 aa3□□□□□ -1.93
VPS41-212ENST00000482217 M0R129 80 aa3□□□□□ -1.93
VPS41-212ENST00000482217 ZNF73O43830 326 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms