RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 HLA-AP01891 365 aaKnown RBP9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 RLN1P04808 185 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 CLEC3BP05452 202 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 SERPINE2P07093 398 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 CD7P09564 240 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 TRAPPC2P0DI81 140 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 TRAPPC2BP0DI82 140 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 C19orf35Q6ZS72 473 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 OR5B3Q8NH48 314 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 DGCR14Q96DF8 476 aaKnown RBP9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 BSCL2Q96G97 398 aaPredicted RBP9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF436Q9C0F3 470 aaPredicted RBP9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 SRD5A3Q9H8P0 318 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 SCPEP1Q9HB40 452 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF320A2RRD8 509 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 MEIS3P1A6NDR6 274 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 TGOLN2O43493 480 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 SNAPC5O75971 98 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 IGHV3-23P01764 117 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 APOA1P02647 267 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 REG1AP05451 166 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 GPR183P32249 361 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 RFX2P48378 723 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 PLET1Q6UQ28 207 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 UXS1Q8NBZ7 420 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 GPX8Q8TED1 209 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 WDR89Q96FK6 387 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 TMEM56Q96MV1 263 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 NDUFA4L2Q9NRX3 87 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 GAR1Q9NY12 217 aaKnown RBP9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 MLXQ9UH92 298 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 PRNDQ9UKY0 176 aa9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 F11RQ9Y624 299 aaKnown RBP9.12□□□□□ -0.95
SQSTM1-207ENST00000481335 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 PMP2P02689 132 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 FCER2P06734 321 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 OR13C7P0DN81 318 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 RCVRNP35243 200 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 HRH1P35367 487 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 TGFBR1P36897 503 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 WT1-ASQ06250 92 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 DEFB125Q8N687 156 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 OR52B4Q8NGK2 314 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 FCAMRQ8WWV6 532 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 CACNG8Q8WXS5 425 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 FXYD6Q9H0Q3 95 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 DAZ1Q9NQZ3 744 aaKnown RBP9.11□□□□□ -0.95
SQSTM1-207ENST00000481335 TEX50A0A1B0GTY4 177 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 RBMY1BA6NDE4 496 aaKnown RBP9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 RBMY1EA6NEQ0 496 aaKnown RBP9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 C15orf61A6NNL5 157 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 NDUFA4O00483 81 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 LPAR6P43657 344 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 UCP3P55916 312 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 BTNL8Q6UX41 500 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 RBPMS2Q6ZRY4 209 aaKnown RBP9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 SLC38A6Q8IZM9 456 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 OR10W1Q8NGF6 305 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 FAM110AQ9BQ89 295 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 OR51B2Q9Y5P1 312 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 S4R3C0 116 aa9.1□□□□□ -0.95
SQSTM1-207ENST00000481335 K7EMT4 169 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 TSPAN4O14817 238 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 KRASP01116 189 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 EIF4EP06730 217 aaKnown RBP9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 RPA2P15927 270 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 EDN2P20800 178 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 FCGR2BP31994 310 aaPredicted RBP9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 TSPAN5P62079 268 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 LSM3P62310 102 aaKnown RBP9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF585BQ52M93 769 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 ZFAND6Q6FIF0 208 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 SLC25A24Q6NUK1 477 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 LYSMD2Q8IV50 215 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 OR1P1Q8NH06 330 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 AP3S1Q92572 193 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 FUNDC2Q9BWH2 189 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 GGTLC1Q9BX51 225 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 RYR2Q92736 4967 aa9.09□□□□□ -0.95
SQSTM1-207ENST00000481335 LOC102724200A0A096LPH7 203 aaPredicted RBP9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 C15orf62A8K5M9 175 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 HLA-DMAP28067 261 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 G6PCP35575 357 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms