RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HBA1	P69905	142 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	CCL20	P78556	96 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPL18	Q07020	188 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	GUK1	Q16774	197 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST2H2BE	Q16778	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	IAH1	Q2TAA2	248 aa	Predicted RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	FAM229B	Q4G0N7	80 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SPANXN3	Q5MJ09	141 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	LYRM7	Q5U5X0	104 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM42	Q69YG0	159 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SFXN4	Q6P4A7	337 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173		Q6ZS49	121 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173		Q6ZTI0	123 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SPATA12	Q7Z6I5	190 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMED4	Q7Z7H5	227 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPP25L	Q8N5L8	163 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR13C4	Q8NGS5	318 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SGMS2	Q8NHU3	365 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	MRPL30	Q8TCC3	161 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	C11orf40	Q8WZ69	217 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BH	Q93079	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TOMM6	Q96B49	74 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SCGB3A1	Q96QR1	104 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BN	Q99877	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H2BM	Q99879	126 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM70	Q9BUB7	260 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	DCSTAMP	Q9H295	470 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	CST9L	Q9H4G1	147 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	EFCAB1	Q9HAE3	211 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	NHP2	Q9NX24	153 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	PAQR5	Q9NXK6	330 aa	Predicted RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	IL36B	Q9NZH7	164 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPL26L1	Q9UNX3	145 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	FAM32A	Q9Y421	112 aa	Known RBP	0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	ADAMTSL3	P82987	1691 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	RTL1	A6NKG5	1358 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	STRCP1	A6NGW2	1772 aa		0.68	□□□□□ -2.3
CCNL1-223	ENST00000481173	SNAPC4	Q5SXM2	1469 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	CEP170	Q5SW79	1584 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	NCOA1	Q15788	1441 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		A0A087WUJ7	227 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TGIF2-C20orf24	A0A0A6YYL0	155 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TRAV26-2	A0A0B4J265	109 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		A0A0J9YY10	115 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		A0A1B0GX78	115 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	hADV38S2	A0JD32	116 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	C19orf71	A6NCJ1	209 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	ARRDC5	A6NEK1	342 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	DPRX	A6NFQ7	191 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	GGT3P	A6NGU5	568 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	HMSD	A8MTL9	139 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	ODF3B	A8MYP8	253 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	INMT-MINDY4	F8WBC2	141 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		H3BRN7	92 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		H3BT86	120 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		H7C2G1	150 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	AIP	O00170	330 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	LEPROT	O15243	131 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	FADS1	O60427	444 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	PFDN1	O60925	122 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR7C1	O76099	320 aa	Predicted RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TCL1B	O95988	128 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	HAND1	O96004	215 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	IGHV3-7	P01780	117 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	GPX1	P07203	203 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	C8G	P07360	202 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	LGALS1	P09382	135 aa	Known RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	CTXN2	P0C2S0	81 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPS4Y1	P22090	263 aa	Known RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H1T	P22492	207 aa	Predicted RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	ERP29	P30040	261 aa	Known RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	CCR2	P41597	374 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPL5	P46777	297 aa	Known RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	RAB14	P61106	215 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	LSM6	P62312	80 aa	Known RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TNFAIP6	P98066	277 aa	Predicted RBP	0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	POU6F1	Q14863	301 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	KCNJ8	Q15842	424 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	LGALS9B	Q3B8N2	356 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	LGALS9C	Q6DKI2	356 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	C2orf91	Q6ZV80	131 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	AAED1	Q7RTV5	226 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	KTN1-AS1	Q86SY8	53 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	STX12	Q86Y82	276 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	PACRGL	Q8N7B6	248 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	GDPD1	Q8N9F7	314 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	WFDC11	Q8NEX6	87 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR51A2	Q8NGJ7	313 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	FAM172A	Q8WUF8	416 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	DNAJC9	Q8WXX5	260 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM106A	Q96A25	262 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	C2orf50	Q96LR7	162 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	IMMP2L	Q96T52	175 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	SIGMAR1	Q99720	223 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	NIPSNAP1	Q9BPW8	284 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TXNDC17	Q9BRA2	123 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173		Q9BRP9	147 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	TMEM147	Q9BVK8	224 aa		0.67	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF471	Q9BX82	626 aa	Predicted RBP	0.67	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms