RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TRAPPC2BP0DI82 140 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 APELAP0DMC3 54 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 AARDQ4LEZ3 155 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 SLC35G3Q8N808 338 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 ZNF491Q8N8L2 437 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 OR4F17Q8NGA8 305 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 RNASE11Q8TAA1 199 aaKnown RBP15.37■□□□□ 0.05
LIME1-205ENST00000480139 OR4F4Q96R69 305 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 ALX4Q9H161 411 aaPredicted RBP15.37■□□□□ 0.05
LIME1-205ENST00000480139 SHPKQ9UHJ6 478 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 A0A0B4J293 547 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 A0A0G2JRQ6 117 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 FAM240BA0A1B0GVZ2 78 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 A0A1W2PRX2 142 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 IGLC7A0M8Q6 106 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 PSMB6P28072 239 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 KLK9Q2XQG4 91 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 C4orf3Q8WVX3 66 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 COA4Q9NYJ1 87 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 KLK9Q9UKQ9 250 aa15.36■□□□□ 0.05
LIME1-205ENST00000480139 C9orf170A2RU37 121 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 TSPAN15O95858 294 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 DHFRP00374 187 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 HLA-AP01891 365 aaKnown RBP15.35■□□□□ 0.05
LIME1-205ENST00000480139 OR4E1P0C645 316 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 AREGP15514 252 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 CTRB1P17538 263 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 MECP2P51608 486 aaKnown RBP15.35■□□□□ 0.05
LIME1-205ENST00000480139 RAB25P57735 213 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 TPPP2P59282 170 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 DEFA1P59665 94 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 DEFA3P59666 94 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 HSPE1P61604 102 aaKnown RBP15.35■□□□□ 0.05
LIME1-205ENST00000480139 RUNX1Q01196 453 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 IZUMO4Q1ZYL8 232 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 ANKRD55Q3KP44 614 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 CTRB2Q6GPI1 263 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 KLHL30-AS1Q8NEE0 82 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 ZNF355PQ9NSJ1 428 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 NUDT15Q9NV35 164 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 PRR13Q9NZ81 148 aa15.35■□□□□ 0.05
LIME1-205ENST00000480139 TRBV9A0A0B4J1U6 114 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 RBMXL2O75526 392 aaKnown RBP15.34■□□□□ 0.05
LIME1-205ENST00000480139 TRGV3P03979 118 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 ANXA7P20073 488 aaKnown RBP15.34■□□□□ 0.05
LIME1-205ENST00000480139 PRCDQ00LT1 54 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 DHRS2Q13268 280 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 NMSQ5H8A3 153 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 LYG2Q86SG7 212 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 MRPL41Q8IXM3 137 aaKnown RBP15.34■□□□□ 0.05
LIME1-205ENST00000480139 CASTOR1Q8WTX7 329 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 MS4A10Q96PG2 267 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 CACFD1Q9UGQ2 172 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 VWFP04275 2813 aa15.34■□□□□ 0.05
LIME1-205ENST00000480139 A0A0G2JLM5 398 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 FAM223BA6NKX1 122 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 NUDT19A8MXV4 375 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 DUS4LO95620 317 aaKnown RBP15.33■□□□□ 0.04
LIME1-205ENST00000480139 WT1-ASQ06250 92 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 Q6ZRM9 215 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 C18orf65Q6ZTR6 163 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 LYZL2Q7Z4W2 148 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 FAM223AQ8IWN6 122 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 DUSP18Q8NEJ0 188 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 OR10W1Q8NGF6 305 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 ENKURQ8TC29 256 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 GPR146Q96CH1 333 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 USMG5Q96IX5 58 aa15.33■□□□□ 0.04
LIME1-205ENST00000480139 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.33■□□□□ 0.04
LIME1-205ENST00000480139 INS-IGF2F8WCM5 200 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 I3L521 148 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 ST8SIA3O43173 380 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 C4orf46Q504U0 113 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
LIME1-205ENST00000480139 C8orf86Q6ZUL3 223 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 NECAP1Q8NC96 275 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 PDCD10Q9BUL8 212 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 HINT2Q9BX68 163 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 GNB4Q9HAV0 340 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 CACNG5Q9UF02 275 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 TMED3Q9Y3Q3 217 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 TRRAPQ9Y4A5 3859 aa15.32■□□□□ 0.04
LIME1-205ENST00000480139 TRAV6A0A075B6T7 132 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 H2AFB2P0C5Z0 115 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 SULT1A3P0DMM9 295 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 SULT1A4P0DMN0 295 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 OR13C7P0DN81 318 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 HIST1H1BP16401 226 aaKnown RBP15.31■□□□□ 0.04
LIME1-205ENST00000480139 COQ8AQ8NI60 647 aa15.31■□□□□ 0.04
LIME1-205ENST00000480139 PKD1L1Q8TDX9 2849 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 IGLV11-55A0A075B6I3 123 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 A0A1B0GU03 582 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 CYB5BO43169 146 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 IFNA17P01571 189 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 REG1AP05451 166 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 LGALS1P09382 135 aaKnown RBP15.3■□□□□ 0.04
LIME1-205ENST00000480139 SLC25A6P12236 298 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 RHOGP84095 191 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 SMCO1Q147U7 214 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms