RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZCCHC14Q8WYQ9 949 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 PLEKHA3Q9HB20 300 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 TMEM167BQ9NRX6 74 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 AURKAIP1Q9NWT8 199 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 SLC45A2Q9UMX9 530 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 TP53TG5Q9Y2B4 290 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 TET2Q6N021 2002 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 LBHQ53QV2 105 aaPredicted RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 UTF1Q5T230 341 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 VHLLQ6RSH7 139 aa20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 RPUSD1Q9UJJ7 312 aaKnown RBP20.18■□□□□ 0.82
SYNGAP1-206ENST00000479510 IGHV1-46P01743 117 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 LINC00869P0C866 280 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 PRO1933Q9H354 126 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 IL36BQ9NZH7 164 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 PGPEP1LA6NFU8 196 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 A8MXE2 369 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 J3QR06 171 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 IQCJQ1A5X6 159 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 TEX36Q5VZQ5 186 aa20.17■□□□□ 0.82
SYNGAP1-206ENST00000479510 C2orf83Q53S99 150 aa20.16■□□□□ 0.82
SYNGAP1-206ENST00000479510 BDP1A6H8Y1 2624 aa20.16■□□□□ 0.82
SYNGAP1-206ENST00000479510 A8MWP6 167 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 IGFBP2P18065 325 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 FAM201AQ5SY85 155 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 SPATA31B1PQ5VZV4 182 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 ALKBH2Q6NS38 261 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 OR5B3Q8NH48 314 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 BET1LQ9NYM9 111 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 hADV38S2A0JD32 116 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 SELENOTP62341 195 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 Q6ZS92 163 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 MRPL41Q8IXM3 137 aaKnown RBP20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 OR4P4Q8NGL7 312 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 SLC35D1Q9NTN3 355 aa20.15■□□□□ 0.82
SYNGAP1-206ENST00000479510 CT45A6P0DMU7 189 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 CT45A5P0DMU8 189 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 CT45A7P0DMV0 189 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 IRF2P14316 349 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 ZNF664Q8N3J9 261 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 BEND2Q8NDZ0 799 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 NUP37Q8NFH4 326 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 OR1L8Q8NGR8 309 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 TECRQ9NZ01 308 aaKnown RBP20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 DSCAML1Q8TD84 2053 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 CEACAM8P31997 349 aaPredicted RBP20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 PARD6AQ9NPB6 346 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 LINC00312Q9Y6C7 94 aa20.14■□□□□ 0.81
SYNGAP1-206ENST00000479510 PQLC2Q6ZP29 291 aa20.13■□□□□ 0.81
SYNGAP1-206ENST00000479510 EAF1Q96JC9 268 aaPredicted RBP20.13■□□□□ 0.81
SYNGAP1-206ENST00000479510 CRYABP02511 175 aaKnown RBP20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 OR10J4P0C629 311 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 ZNF90Q03938 601 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 PRSS8Q16651 343 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 OSR1Q8TAX0 266 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 CCL13Q99616 98 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 NABP2Q9BQ15 211 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 HINT2Q9BX68 163 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 K7EN84 100 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 FOXH1O75593 365 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 GNG10P50151 68 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 TAS2R45P59539 299 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 MEF2CQ06413 473 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 DUX4L9Q6RFH8 374 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 ZNF833PQ6ZTB9 187 aa20.12■□□□□ 0.81
SYNGAP1-206ENST00000479510 TANC2Q9HCD6 1990 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 TRBV9A0A0B4J1U6 114 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 TEX50A0A1B0GTY4 177 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 ZNF705GA8MUZ8 300 aaPredicted RBP20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 CD40P25942 277 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 MIR17HGQ75NE6 70 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 NDUFAF3Q9BU61 184 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 GAL3ST2Q9H3Q3 398 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 WDFY4Q6ZS81 3184 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 DSCAMO60469 2012 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 NKX6-3A6NJ46 265 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 INS-IGF2F8WCM5 200 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 RPL19P84098 196 aaKnown RBP20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 ZNF600Q6ZNG1 722 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 FAM216BQ8N7L0 139 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 CACNG8Q8WXS5 425 aa20.11■□□□□ 0.81
SYNGAP1-206ENST00000479510 OR5G3P0C626 314 aa20.1■□□□□ 0.81
SYNGAP1-206ENST00000479510 DEFB108BQ8NET1 73 aa20.1■□□□□ 0.81
SYNGAP1-206ENST00000479510 LRFN3Q9BTN0 628 aa20.1■□□□□ 0.81
SYNGAP1-206ENST00000479510 ESDP10768 282 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 ADMP35318 185 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 LGALS4P56470 323 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 RNF2Q99496 336 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 TNFRSF1AP19438 455 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 RAB4BP61018 213 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 PSG5Q15238 335 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 RPEL1Q2QD12 228 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 KRTCAP3Q53RY4 240 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 RPRMLQ8N4K4 120 aa20.09■□□□□ 0.81
SYNGAP1-206ENST00000479510 HELTA6NFD8 242 aa20.08■□□□□ 0.81
SYNGAP1-206ENST00000479510 SRRM4A7MD48 611 aaKnown RBP20.08■□□□□ 0.81
SYNGAP1-206ENST00000479510 MMP23AO75900 390 aa20.08■□□□□ 0.81
SYNGAP1-206ENST00000479510 APOA2P02652 100 aa20.08■□□□□ 0.81
SYNGAP1-206ENST00000479510 IGKV1-16P04430 117 aa20.08■□□□□ 0.81
SYNGAP1-206ENST00000479510 OR4A8P0C604 315 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms