RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 TBC1D26Q86UD7 250 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 OR10W1Q8NGF6 305 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 OR5B3Q8NH48 314 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 ZNF502Q8TBZ5 544 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 RAB2BQ8WUD1 216 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 SEC22AQ96IW7 307 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 ATP6V0BQ99437 205 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 TSC22D3Q99576 134 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 TMEM14BQ9NUH8 114 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 FKBP11Q9NYL4 201 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 THYN1Q9P016 225 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 PRNDQ9UKY0 176 aa17.75■□□□□ 0.43
C9orf3-215ENST00000478473 A8MWP6 167 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 OR2C1O95371 312 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 CD74P04233 296 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 IGHV4-30-4P0DP06 118 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 G6PCP35575 357 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 SSBP1Q04837 148 aaKnown RBP17.74■□□□□ 0.43
C9orf3-215ENST00000478473 RNASE10Q5GAN6 216 aaKnown RBP17.74■□□□□ 0.43
C9orf3-215ENST00000478473 CLEC19AQ6UXS0 136 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 LAX1Q8IWV1 398 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 VN1R17PQ8TDU5 208 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 ZC4H2Q9NQZ6 224 aa17.74■□□□□ 0.43
C9orf3-215ENST00000478473 MFSD2BA6NFX1 497 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 C2orf70A6NJV1 201 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 M0QYG6 137 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 SNAPC5O75971 98 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 IGKV1-39P01597 117 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 IGKV1D-39P04432 117 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 RPA2P15927 270 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 ARL3P36405 182 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 TMBIM6P55061 237 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 MRPS10P82664 201 aaKnown RBP17.73■□□□□ 0.43
C9orf3-215ENST00000478473 TMEM229BQ8NBD8 167 aa17.73■□□□□ 0.43
C9orf3-215ENST00000478473 LSM10Q969L4 123 aaKnown RBP17.73■□□□□ 0.43
C9orf3-215ENST00000478473 IZUMO1RA6ND01 250 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 C15orf61A6NNL5 157 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 GABARAPH6UMI1 98 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 CYB5BO43169 146 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 HLA-AP01891 365 aaKnown RBP17.72■□□□□ 0.43
C9orf3-215ENST00000478473 CD3DP04234 171 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 OR13C7P0DN81 318 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 DEFB114Q30KQ6 69 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 SGPP2Q8IWX5 399 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 DYNC2LI1Q8TCX1 351 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 TECRQ9NZ01 308 aaKnown RBP17.72■□□□□ 0.43
C9orf3-215ENST00000478473 OR51B2Q9Y5P1 312 aa17.72■□□□□ 0.43
C9orf3-215ENST00000478473 F11RQ9Y624 299 aaKnown RBP17.72■□□□□ 0.43
C9orf3-215ENST00000478473 CTDSP2O14595 271 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 IFNA6P05013 189 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 CLEC3BP05452 202 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 FOLR2P14207 255 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 FAM106AQ4KMX7 169 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 TM2D3Q9BRN9 247 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 CCDC59Q9P031 241 aaKnown RBP17.71■□□□□ 0.43
C9orf3-215ENST00000478473 RABL2AQ9UBK7 228 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-215ENST00000478473 RABL2BQ9UNT1 228 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 NSG2Q9Y328 171 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 S4R3C0 116 aa17.71■□□□□ 0.43
C9orf3-215ENST00000478473 DBX1A6NMT0 343 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 ZNF785A8K8V0 405 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 IGHV3-23P01764 117 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 MFAP2P55001 183 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 CD300EQ496F6 205 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-215ENST00000478473 CLVS1Q8IUQ0 354 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-215ENST00000478473 OR1L6Q8NGR2 347 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 TMEM56Q96MV1 263 aa17.7■□□□□ 0.42
C9orf3-215ENST00000478473 TMEM213A2RRL7 107 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 CTDSPLO15194 276 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 C8orf88P0DMB2 117 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 CBLN1P23435 193 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 TAS2R19P59542 299 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 GTSCR1Q86UQ5 136 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 TERB2Q8NHR7 220 aa17.69■□□□□ 0.42
C9orf3-215ENST00000478473 KMT2CQ8NEZ4 4911 aaKnown RBP17.68■□□□□ 0.42
C9orf3-215ENST00000478473 P0C879 139 aa17.68■□□□□ 0.42
C9orf3-215ENST00000478473 RPL5P46777 297 aaKnown RBP17.68■□□□□ 0.42
C9orf3-215ENST00000478473 ELLP55199 621 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-215ENST00000478473 RNASE12Q5GAN4 147 aaKnown RBP17.68■□□□□ 0.42
C9orf3-215ENST00000478473 OR4D10Q8NGI6 311 aa17.68■□□□□ 0.42
C9orf3-215ENST00000478473 SMIM4Q8WVI0 70 aa17.68■□□□□ 0.42
C9orf3-215ENST00000478473 ZNF436Q9C0F3 470 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-215ENST00000478473 RGS5O15539 181 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 PIGPP57054 158 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 STEAP1BQ6NZ63 245 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 LINC00322Q6ZN03 302 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-215ENST00000478473 H2BFWTQ7Z2G1 175 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 ZNF114Q8NC26 417 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 OR1P1Q8NH06 330 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 MARC2Q969Z3 335 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 RCHY1Q96PM5 261 aa17.67■□□□□ 0.42
C9orf3-215ENST00000478473 F8W735 103 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-215ENST00000478473 K7EIM0 57 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 TGOLN2O43493 480 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 RAB3DO95716 219 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 EDN2P20800 178 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 GPR183P32249 361 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 HSPE1P61604 102 aaKnown RBP17.66■□□□□ 0.42
C9orf3-215ENST00000478473 SLC25A24Q6NUK1 477 aa17.66■□□□□ 0.42
C9orf3-215ENST00000478473 OR2C3Q8N628 320 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms