RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 GCSAMQ8N6F7 178 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR10G9Q8NGN4 311 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR10G7Q8NGN6 311 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR1K1Q8NGR3 316 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR2T10Q8NGZ9 312 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR4F5Q8NH21 305 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 DTD1Q8TEA8 209 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CT55Q8WUE5 264 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 FRZBQ92765 325 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 RDH5Q92781 318 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 RAB1CQ92928 201 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 GMPPAQ96IJ6 420 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 CYYR1Q96J86 154 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR4C12Q96R67 309 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 OR4F4Q96R69 305 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 PYGO2Q9BRQ0 406 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 RSG1Q9BU20 258 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 MRPL37Q9BZE1 423 aaKnown RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 GPR61Q9BZJ8 451 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 RBKSQ9H477 322 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 AKIRIN1Q9H9L7 192 aaPredicted RBP3.53□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF581Q9P0T4 197 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 PPP1R3CQ9UQK1 317 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 MED12Q93074 2177 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 DOCK7Q96N67 2140 aa3.53□□□□□ -1.84
GPNMB-210ENST00000478451 SDK2Q58EX2 2172 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 A0A0G2JRQ6 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 MDFIC2A0A1B0GVS7 189 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 A0A1W2PPV4 95 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 XKRY2A2RUG3 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 ARGFXA6NJG6 315 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 LRRC30A6NM36 301 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 IQCF6A8MYZ5 107 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 SYNGR1O43759 233 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GGCTO75223 188 aaKnown RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE7O76087 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 TNFSF15O95150 251 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 OR2H2O95918 312 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 HAND1O96004 215 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 IGKV1-5P01602 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 IGHV3-9P01782 118 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GYPAP02724 150 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 PFN1P07737 140 aaKnown RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 SOD3P08294 240 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 CA6P23280 308 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 CNN1P51911 297 aaKnown RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 ERVK11-1P61568 191 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 ERVK-16P61578 105 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GNB2P62879 340 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE1Q13065 139 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE4Q13068 117 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 RAB31Q13636 194 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 SLC10A1Q14973 349 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 OR1C1Q15619 314 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF726P1Q15940 193 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 VWC2Q2TAL6 325 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 SMIM21Q3B7S5 101 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE2EQ4V326 116 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GFI1BQ5VTD9 330 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 C9orf135Q5VTT2 229 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 FBXW9Q5XUX1 488 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE2AQ6NT46 116 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 SPNS3Q6ZMD2 512 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 BATF2Q8N1L9 274 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 FGFRL1Q8N441 504 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 DRAM1Q8N682 238 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 CORO2AQ92828 525 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 RPUSD4Q96CM3 377 aaKnown RBP3.52□□□□□ -1.85
GPNMB-210ENST00000478451 LURAP1Q96LR2 239 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 UHRF2Q96PU4 802 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 HIST1H2BLQ99880 126 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 TTTY12Q9BZ98 90 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 OR2D2Q9H210 308 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 PARLQ9H300 379 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 DEPPQ9NTK1 212 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 OR1A1Q9P1Q5 309 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 MDFICQ9P1T7 246 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 GAGE2DQ9UEU5 116 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 ARL2-SNX15V9GYD0 113 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 FREM1Q5H8C1 2179 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 CDH23Q9H251 3354 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 LAMA3Q16787 3333 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 KIAA2026Q5HYC2 2103 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 MED12LQ86YW9 2145 aa3.52□□□□□ -1.85
GPNMB-210ENST00000478451 TRBV9A0A0B4J1U6 114 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 A0A1W2PPQ1 181 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 ODAMA1E959 279 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 FAM166BA8MTA8 275 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 C11orf94C9JXX5 98 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 M0QZK8 103 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 SLC31A2O15432 143 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 RBFOX2O43251 390 aaKnown RBP eCLIP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 CXorf1O96002 111 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms