RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 WISP2O76076 250 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 KBTBD11O94819 623 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGKV1D-33P01593 117 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGKV1-33P01594 117 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 CRYAAP02489 173 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OPN1MWP04001 364 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 CXCL1P09341 107 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OPN1MW2P0DN77 364 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OPN1MW3P0DN78 364 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV3-43DP0DP04 118 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 NQO2P16083 231 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 EGR1P18146 543 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 WT1P19544 449 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 MDKP21741 143 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SSTR5P35346 364 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 RAB7AP51149 207 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 KLF3P57682 345 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 BRWD1-AS2P59051 145 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR2B8PP59922 312 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SPCS3P61009 180 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 ERVK-16P61578 105 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 B2MP61769 119 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 MEF2BQ02080 365 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SRSF6Q13247 344 aaKnown RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 EDDM3AQ14507 147 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM249Q2WGJ8 235 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 MORN2Q502X0 79 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 PDLIM3Q53GG5 364 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 C1orf185Q5T7R7 199 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 PRAMEF5Q5TYX0 476 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 WDR25Q64LD2 544 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 NCR3LG1Q68D85 454 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGFL3Q6UXB1 125 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 BTNL3Q6UXE8 466 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 CYP2G1PQ6ZSU1 146 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SSX7Q7RTT5 188 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR2Z1Q8NG97 314 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR10G9Q8NGN4 311 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR10G7Q8NGN6 311 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR4A16Q8NH70 328 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 RAB1CQ92928 201 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 S100PBPQ96BU1 408 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 NEIL1Q96FI4 390 aaPredicted RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SMIM7Q9BQ49 75 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 GGACTQ9BVM4 153 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 NPCDR1Q9BY65 106 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 KCNIP2Q9NS61 270 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OR6C3Q9NZP0 311 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 GNG12Q9UBI6 72 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 FZR1Q9UM11 496 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SLC45A2Q9UMX9 530 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 YLPM1P49750 1951 aaKnown RBP4.07□□□□□ -1.76
SF3B6-202ENST00000478050 CELSR2Q9HCU4 2923 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGLV3-9A0A075B6K5 115 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 IGKV1D-17A0A075B6S4 117 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TGIF2-C20orf24A0A0A6YYL0 155 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TRGV8A0A0C4DH27 118 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 PRSS29PA6NIE9 313 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 C15orf62A8K5M9 175 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 DEFB108AA8MXU0 73 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SEC14L6B5MCN3 397 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 M0R1B8 84 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 M0R1X1 148 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 FCGR3BO75015 233 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CLN5O75503 358 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 LHBP01229 141 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TFF1P04155 84 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 OR9G9P0C7N8 305 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 S100PP25815 95 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TIMP3P35625 211 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CDX1P47902 265 aaPredicted RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CDC34P49427 236 aaPredicted RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 THBS3P49746 956 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF83P51522 516 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SELENOVP59797 346 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CD81P60033 236 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CTAG1AP78358 180 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TFF3Q07654 80 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM241Q24JQ0 296 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 BSXQ3C1V8 233 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 FAM53AQ6NSI3 398 aaPredicted RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF343Q6P1L6 599 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 Q6ZS92 163 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SEM1Q6ZVN7 128 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SLC16A13Q7RTY0 426 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 MOGAT3Q86VF5 341 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 TPRX1Q8N7U7 411 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 OR4S2Q8NH73 311 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 RFESDQ8TAC1 157 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 NANPQ8TBE9 248 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 FAM222BQ8WU58 562 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 ADTRPQ96IZ2 230 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 FAM210BQ96KR6 192 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 OR2V2Q96R30 315 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 S1PR3Q99500 378 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms