RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 AKR1D1P51857 326 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 PRCDQ00LT1 54 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 FBXL19-AS1Q494R0 122 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF343Q6P1L6 599 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 OSR1Q8TAX0 266 aaPredicted RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 SSMEM1Q8WWF3 244 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 RPUSD4Q96CM3 377 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 MALSU1Q96EH3 234 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 HARBI1Q96MB7 349 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 SMIM7Q9BQ49 75 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 NPVFQ9HCQ7 196 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 RALYQ9UKM9 306 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 LSM4Q9Y4Z0 139 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 CXorf65A6NEN9 183 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 PRB1P04280 392 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 RPL35P42766 123 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 DIAPH2-AS1Q14236 149 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 MUC15Q8N387 334 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 LINC00311Q8N616 119 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 OR5AN1Q8NGI8 311 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 Q8WTZ3 238 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 FKBP11Q9NYL4 201 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 KLF2Q9Y5W3 355 aaPredicted RBP8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 URGCP-MRPS24S4R325 110 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 FAM208BQ5VWN6 2430 aa8.97□□□□□ -0.97
HLA-DMB-260ENST00000477537 FLNCQ14315 2725 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 TMEM250H0YL14 139 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 ELOBQ15370 118 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 TMEM177Q53S58 311 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 TEPPQ6URK8 271 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 C8orf31Q8N9H6 132 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 ZNF596Q8TC21 504 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 RAB1CQ92928 201 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 TMEM186Q96B77 213 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 FLYWCH2Q96CP2 140 aaKnown RBP8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 NABP2Q9BQ15 211 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 KCNIP2Q9NS61 270 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 NAT8Q9UHE5 227 aa8.96□□□□□ -0.97
HLA-DMB-260ENST00000477537 TGIF2-C20orf24A0A0A6YYL0 155 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 CXCL1P09341 107 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 COL8A2P25067 703 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 B2MP61769 119 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 ADORA2A-AS1P86434 159 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 CDSNQ15517 529 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 ADIRFQ15847 76 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM241Q24JQ0 296 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 FAM71F2Q6NXP2 309 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR5B3Q8NH48 314 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR9G1Q8NH87 305 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 NEIL1Q96FI4 390 aaPredicted RBP8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 PARLQ9H300 379 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 HIVEP3Q5T1R4 2406 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 C11orf94C9JXX5 98 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 S100A6P06703 90 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGFBP2P18065 325 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 UBE2G2P60604 165 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 RAB31Q13636 194 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM249Q2WGJ8 235 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 ZNF672Q499Z4 452 aaPredicted RBP8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 CYP2G1PQ6ZSU1 146 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 LINC00518Q8N0U6 118 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 STPG3Q8N7X2 389 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 COMMD5Q9GZQ3 224 aa8.95□□□□□ -0.98
HLA-DMB-260ENST00000477537 MYO18BQ8IUG5 2567 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 A0A087X0M5 115 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 TRBV23-1A0A0A0MS06 115 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 A0A1B0GX30 115 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 FNDC10F2Z333 226 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 RNASE2P10153 161 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 SFTPCP11686 197 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 RPL8P62917 257 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 C2orf83Q53S99 150 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 PDPNQ86YL7 162 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 TGIF2LXQ8IUE1 241 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 C11orf42Q8N5U0 333 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR10W1Q8NGF6 305 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR4C13Q8NGP0 309 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 ST6GALNAC6Q969X2 333 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 WASHC3Q9Y3C0 194 aa8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 ANKHD1Q8IWZ3 2542 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-260ENST00000477537 C5orf52A6NGY3 159 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 CLDN34H7C241 214 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 RPL29P47914 159 aaKnown RBP8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 ATP5G3P48201 142 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 ZNF137PP52743 207 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 RPL23P62829 140 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms