RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 SNX29P2Q8IUI4 249 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 ISOC1Q96CN7 298 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 DNAH7Q8WXX0 4024 aa11.89□□□□□ -0.51
CLDN11-204ENST00000477531 TEX50A0A1B0GTY4 177 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 OR13C7P0DN81 318 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 PTBP1P26599 531 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLDN11-204ENST00000477531 RPL5P46777 297 aaKnown RBP11.88□□□□□ -0.51
CLDN11-204ENST00000477531 CASC10Q5T4H9 136 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 ZNF57Q68EA5 555 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-204ENST00000477531 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 CADM3Q8N126 398 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 GDPD1Q8N9F7 314 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 PLEKHA3Q9HB20 300 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
CLDN11-204ENST00000477531 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 SERPINE2P07093 398 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 GPR183P32249 361 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 RCVRNP35243 200 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 G6PCP35575 357 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 ANKRD55Q3KP44 614 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 PHLDA2Q53GA4 152 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 SLC16A13Q7RTY0 426 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 VN1R17PQ8TDU5 208 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 AP3S1Q92572 193 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
CLDN11-204ENST00000477531 MARC2Q969Z3 335 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 TMEM56Q96MV1 263 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 TSC22D3Q99576 134 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 ZC4H2Q9NQZ6 224 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 PRNDQ9UKY0 176 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 CEPT1Q9Y6K0 416 aa11.87□□□□□ -0.51
CLDN11-204ENST00000477531 TMEM213A2RRL7 107 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 A8MWP6 167 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 OR11H12B2RN74 326 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 HPGDSO60760 199 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 CACNG8Q8WXS5 425 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 NDUFA4L2Q9NRX3 87 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
CLDN11-204ENST00000477531 NSG2Q9Y328 171 aa11.86□□□□□ -0.51
CLDN11-204ENST00000477531 TGOLN2O43493 480 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 CD7P09564 240 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 ELK1P19419 428 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 EDN2P20800 178 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
CLDN11-204ENST00000477531 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 RBPMS2Q6ZRY4 209 aaKnown RBP11.85□□□□□ -0.51
CLDN11-204ENST00000477531 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 OR5B3Q8NH48 314 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 WDR89Q96FK6 387 aaPredicted RBP11.85□□□□□ -0.51
CLDN11-204ENST00000477531 SRD5A3Q9H8P0 318 aa11.85□□□□□ -0.51
CLDN11-204ENST00000477531 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
CLDN11-204ENST00000477531 UCP3P55916 312 aa11.84□□□□□ -0.51
CLDN11-204ENST00000477531 WT1-ASQ06250 92 aa11.84□□□□□ -0.51
CLDN11-204ENST00000477531 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
CLDN11-204ENST00000477531 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
CLDN11-204ENST00000477531 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
CLDN11-204ENST00000477531 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
CLDN11-204ENST00000477531 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
CLDN11-204ENST00000477531 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 GABARAPO95166 117 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 PGAM2P15259 253 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 ZNF182P17025 639 aaPredicted RBP11.83□□□□□ -0.52
CLDN11-204ENST00000477531 SPSB3Q6PJ21 355 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 BTNL8Q6UX41 500 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 UNQ9165/PRO28630Q6UXU0 137 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 TMEM61Q8N0U2 210 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 C15orf40Q8WUR7 153 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 ATP6V0BQ99437 205 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 BCL7BQ9BQE9 202 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
CLDN11-204ENST00000477531 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 MLXQ9UH92 298 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
CLDN11-204ENST00000477531 RYR3Q15413 4870 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 NOL3O60936 208 aaKnown RBP11.82□□□□□ -0.52
CLDN11-204ENST00000477531 SCAF4O95104 1147 aaKnown RBP11.82□□□□□ -0.52
CLDN11-204ENST00000477531 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms