RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	NIPSNAP1	Q9BPW8	284 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	HOPX	Q9BPY8	73 aa	Predicted RBP	1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	EFCAB1	Q9HAE3	211 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	XAGE1A	Q9HD64	81 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	UQCC1	Q9NVA1	299 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	TXNL4B	Q9NX01	149 aa	Known RBP	1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	PYCARD	Q9ULZ3	195 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	UTP11	Q9Y3A2	253 aa	Known RBP	1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	HEY1	Q9Y5J3	304 aa		1.83	□□□□□ -2.12
RBM39-231	ENST00000477334	ATAD5	Q96QE3	1844 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	MYO16	Q9Y6X6	1858 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	TMEM235	A6NFC5	223 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	GGT3P	A6NGU5	568 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	OR5K4	A6NMS3	321 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C2orf74	A8MZ97	194 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	CREBL2	O60519	120 aa	Predicted RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	IFNA10	P01566	189 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C8G	P07360	202 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	UCHL1	P09936	223 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	CCL3	P10147	92 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	PPIB	P23284	216 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	CA5A	P35218	305 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	RBM11	P57052	281 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	TAS2R41	P59536	307 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	HIST1H4A	P62805	103 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	TSN	Q15631	228 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C12orf74	Q32Q52	190 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	LGALS9B	Q3B8N2	356 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	LGALS9C	Q6DKI2	356 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C3orf33	Q6P1S2	294 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	RPL22L1	Q6P5R6	122 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C2orf91	Q6ZV80	131 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	AKAP14	Q86UN6	197 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	GPR146	Q96CH1	333 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	TTTY13	Q9BZ97	58 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	C11orf68	Q9H3H3	251 aa	Known RBP	1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	BIN3	Q9NQY0	253 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	IL36B	Q9NZH7	164 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	COL18A1	P39060	1754 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	ADAMTSL1	Q8N6G6	1762 aa		1.82	□□□□□ -2.12
RBM39-231	ENST00000477334	HECW2	Q9P2P5	1572 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	IGLV10-54	A0A075B6I4	117 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	TRAPPC13	A5PLN9	417 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	C19orf71	A6NCJ1	209 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334		H3BPC8	53 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334		J3QRK9	145 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	S1PR2	O95136	353 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	BPGM	P07738	259 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	SMIM17	P0DL12	118 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	GZMB	P10144	247 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	IFI30	P13284	250 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	SERPINB1	P30740	379 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	XCL1	P47992	114 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	HSPE1	P61604	102 aa	Known RBP	1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	RHOB	P62745	196 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	FAM229B	Q4G0N7	80 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	LYRM7	Q5U5X0	104 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	ZNF705A	Q6ZN79	300 aa	Predicted RBP	1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	GOLT1A	Q6ZVE7	132 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	LYPD6	Q86Y78	171 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	CLDND2	Q8NHS1	167 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	TOMM6	Q96B49	74 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	ERMAP	Q96PL5	475 aa	Predicted RBP	1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	GPER1	Q99527	375 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	PBDC1	Q9BVG4	233 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	PCBD2	Q9H0N5	130 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	RNASE7	Q9H1E1	156 aa	Known RBP	1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	NAV1	Q8NEY1	1877 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	ROBO3	Q96MS0	1386 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	MIA2	Q96PC5	1412 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	RERE	Q9P2R6	1566 aa		1.81	□□□□□ -2.12
RBM39-231	ENST00000477334	DICER1	Q9UPY3	1922 aa	Known RBP	1.8	□□□□□ -2.12
RBM39-231	ENST00000477334		A0A1W2PQD3	144 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	IRGM	A1A4Y4	181 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	SDHAF1	A6NFY7	115 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	C17orf98	A8MV24	154 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	C3orf84	H3BNL1	204 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	LEPROT	O15243	131 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	NDUFC2	O95298	119 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	PRM2	P04554	102 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	CRH	P06850	196 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	CYBA	P13498	195 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	MSN	P26038	577 aa	Known RBP	1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	S100A4	P26447	101 aa	Known RBP	1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	EMP1	P54849	157 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	DEFA3	P59666	94 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	GNG3	P63215	75 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	RHEB	Q15382	184 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	MIA	Q16674	131 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	SPANXN3	Q5MJ09	141 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	IBA57	Q5T440	356 aa	Known RBP	1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	C9orf64	Q5T6V5	341 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	AADACL3	Q5VUY0	350 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334		Q6ZS52	159 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	ZNF767P	Q75MW2	155 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	SLC35E3	Q7Z769	313 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	OR11H6	Q8NGC7	330 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	OR13C4	Q8NGS5	318 aa		1.8	□□□□□ -2.12
RBM39-231	ENST00000477334	RASSF5	Q8WWW0	418 aa		1.8	□□□□□ -2.12

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms