RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 IL15RAQ13261 267 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 DIAPH2-AS1Q14236 149 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 LAGE3Q14657 143 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 MMDQ15546 238 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 UBE2V2Q15819 145 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PHLDA2Q53GA4 152 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FAM201AQ5SY85 155 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 IBA57Q5T440 356 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 TSPO2Q5TGU0 170 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TMEM236Q5W0B7 351 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ZNF660Q6AZW8 331 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 AMMECR1LQ6DCA0 310 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SLC25A26Q70HW3 274 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 LHFPL1Q86WI0 220 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SGPP2Q8IWX5 399 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 MMD2Q8IY49 270 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SAXO1Q8IYX7 474 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PRR22Q8IZ63 422 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 DEFB125Q8N687 156 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 COX18Q8N8Q8 333 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ZFP41Q8N8Y5 198 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SUMF2Q8NBJ7 301 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR2M3Q8NG83 312 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR4F17Q8NGA8 305 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR11H7Q8NGC8 314 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR4B1Q8NGF8 309 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR2A12Q8NGT7 310 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR10D3Q8NH80 312 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TSLPQ969D9 159 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PNPLA2Q96AD5 504 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ATXN7L3BQ96GX2 97 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 FMC1Q96HJ9 113 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 C2orf48Q96LS8 159 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CARD19Q96LW7 228 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 YPEL2Q96QA6 119 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OR4F4Q96R69 305 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 RARRES2Q99969 163 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 MRPL45Q9BRJ2 306 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 VAMP8Q9BV40 100 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PBOV1Q9GZY1 135 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 BANF2Q9H503 90 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 PDFQ9HBH1 243 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 NPVFQ9HCQ7 196 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 HEBP1Q9NRV9 189 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 TNFRSF19Q9NS68 423 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 EHFQ9NZC4 300 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 KCNIP1Q9NZI2 227 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 WRAP73Q9P2S5 460 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 UQCR10Q9UDW1 63 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 OARD1Q9Y530 152 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ORC6Q9Y5N6 252 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 INSIG2Q9Y5U4 225 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 SOX21Q9Y651 276 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 ITGB4P16144 1822 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 CDC42BPGQ6DT37 1551 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 XRN1Q8IZH2 1706 aaKnown RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 NWD2Q9ULI1 1742 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 NUP210Q8TEM1 1887 aaPredicted RBP1.88□□□□□ -2.11
XRN1-211ENST00000477237 DOCK3Q8IZD9 2030 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 HECW1Q76N89 1606 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 USP32Q8NFA0 1604 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 ALKQ9UM73 1620 aa1.88□□□□□ -2.11
XRN1-211ENST00000477237 LAMB1P07942 1786 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 MYH8P13535 1937 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 USP54Q70EL1 1684 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 TUBGCP6Q96RT7 1819 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 TRAV26-2A0A0B4J265 109 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 TEX50A0A1B0GTY4 177 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 TEX48A0A1B0GUV7 120 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 FAM240AA0A1B0GVK7 77 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 MEIS3P1A6NDR6 274 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 GGT3PA6NGU5 568 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 OR51F1A6NGY5 319 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 OR4C45A6NMZ5 311 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 GGTLC3B5MD39 225 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 K7EQS6 105 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 RER1O15258 196 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 SLC37A4O43826 429 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 RAMP1O60894 148 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 NDUFC2O95298 119 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 IGHG1P01857 330 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 FGF1P05230 155 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 PGA3P0DJD8 388 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 CTSEP14091 401 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 SFTPDP35247 375 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 SNCAP37840 140 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 LPAR6P43657 344 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 NMUP48645 174 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 KLK7P49862 253 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 Q0VG73 95 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 ZNF79Q15937 498 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 FER1L6Q2WGJ9 1857 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 C12orf74Q32Q52 190 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 Q499Y3 187 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 TCEAL5Q5H9L2 206 aa1.87□□□□□ -2.11
XRN1-211ENST00000477237 MEIG1Q5JSS6 88 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms