RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 RBPMSQ93062 196 aaKnown RBP13.38□□□□□ -0.27
SMARCD3-210ENST00000477169 FOXA2Q9Y261 457 aaPredicted RBP13.38□□□□□ -0.27
SMARCD3-210ENST00000477169 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 A0A1W2PN81 502 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 CGB1A6NKQ9 187 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 TEX22C9J3V5 150 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 SFT2D2O95562 160 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 APELAP0DMC3 54 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 ANXA3P12429 323 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 ANXA7P20073 488 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 VAMP1P23763 118 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 CHRNA7P36544 502 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 AKR1C2P52895 323 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 IL22RA2Q969J5 263 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 PHB2Q99623 299 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 SPIN2AQ99865 258 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 SPIN2BQ9BPZ2 258 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 C20orf85Q9H1P6 137 aa13.37□□□□□ -0.27
SMARCD3-210ENST00000477169 A0A0G2JRQ6 117 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 TEX50A0A1B0GTY4 177 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 RAB25P57735 213 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 OR2B8PP59922 312 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 DEFB136Q30KP8 78 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 ANKRD55Q3KP44 614 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 OR5T1Q8NG75 326 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 OR5M8Q8NGP6 311 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 MYOZ3Q8TDC0 251 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 RRNAD1Q96FB5 475 aaKnown RBP13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 TMEM68Q96MH6 324 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 COMMD5Q9GZQ3 224 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 PRNDQ9UKY0 176 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 OR51B2Q9Y5P1 312 aa13.36□□□□□ -0.27
SMARCD3-210ENST00000477169 A0A0B4J293 547 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 C9orf170A2RU37 121 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 OR4E1P0C645 316 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 SRPXP78539 464 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 TMEM65Q6PI78 240 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 LGI3Q8N145 548 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 SLC35G3Q8N808 338 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 OR1L8Q8NGR8 309 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 RNASE11Q8TAA1 199 aaKnown RBP13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 CASTOR1Q8WTX7 329 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 ALX4Q9H161 411 aaPredicted RBP13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
SMARCD3-210ENST00000477169 TRAV6A0A075B6T7 132 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 DEFA1P59665 94 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 DEFA3P59666 94 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 DCTN2Q13561 401 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 Q6ZRM9 215 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 LYZL2Q7Z4W2 148 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 LYG2Q86SG7 212 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 FAM219AQ8IW50 185 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 GPR146Q96CH1 333 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 QTRT1Q9BXR0 403 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
SMARCD3-210ENST00000477169 A0A0B4J2A0 478 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 HLA-AP01891 365 aaKnown RBP13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 TRAPPC2P0DI81 140 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 TRAPPC2BP0DI82 140 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 AREGP15514 252 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 RAB9AP51151 201 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 DHRS2Q13268 280 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 FHL3Q13643 280 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 KIAA0141Q14154 515 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 C9orf66Q5T8R8 295 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 NRARPQ7Z6K4 114 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 LRTM2Q8N967 370 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 OR11H1Q8NG94 326 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 OR5B3Q8NH48 314 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 ENKURQ8TC29 256 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 SHPKQ9UHJ6 478 aa13.33□□□□□ -0.28
SMARCD3-210ENST00000477169 COL7A1Q02388 2944 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 IGLC7A0M8Q6 106 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 I3L521 148 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 RUNX1Q01196 453 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 NMSQ5H8A3 153 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 ZNF429Q86V71 674 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 MS4A10Q96PG2 267 aa13.32□□□□□ -0.28
SMARCD3-210ENST00000477169 SRSF8Q9BRL6 282 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms