RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	SCGB2B2	Q4G0G5	96 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	SLC25A42	Q86VD7	318 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	FAM223A	Q8IWN6	122 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR51S1	Q8NGJ8	323 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	TRIM63	Q969Q1	353 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	ZNF486	Q96H40	463 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	RABL2B	Q9UNT1	228 aa		10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544	LSM4	Q9Y4Z0	139 aa	Known RBP	10.43	□□□□□ -0.74
RAB5A-208	ENST00000476544		A0A0G2JRQ6	117 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	C3orf85	A0A1B0GTC6	90 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	NOL3	O60936	208 aa	Known RBP	10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	IGHV3-23	P01764	117 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	HLA-A	P01891	365 aa	Known RBP	10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	AKAIN1	P0CW23	69 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	TRAPPC2	P0DI81	140 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	TRAPPC2B	P0DI82	140 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR13C7	P0DN81	318 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	ECI1	P42126	302 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	KLF9	Q13886	244 aa	Predicted RBP	10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	MEF2D	Q14814	521 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544		Q6ZRM9	215 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR6Q1	Q8NGQ2	317 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR1L8	Q8NGR8	309 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	ZFAND1	Q8TCF1	268 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	GLYATL2	Q8WU03	294 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	CCDC140	Q96MF4	163 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	SRSF8	Q9BRL6	282 aa	Known RBP	10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	QTRT1	Q9BXR0	403 aa	Known RBP	10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	GPR61	Q9BZJ8	451 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	COMMD5	Q9GZQ3	224 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR51B2	Q9Y5P1	312 aa		10.42	□□□□□ -0.74
RAB5A-208	ENST00000476544	DNAH9	Q9NYC9	4486 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	MFSD2B	A6NFX1	497 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544		H0Y980	276 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	SERPINE2	P07093	398 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	CSN3	P07498	182 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	ETV6	P41212	452 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	INSL3	P51460	131 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	SYNJ2BP	P57105	145 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	ERVK-16	P61578	105 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	EXOSC2	Q13868	293 aa	Known RBP	10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	HAPLN4	Q86UW8	402 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	ZNF429	Q86V71	674 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	LHFPL5	Q8TAF8	219 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	TMEM230	Q96A57	120 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	ZNF414	Q96IQ9	312 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	PRR25	Q96S07	402 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	SDHC	Q99643	169 aa	Predicted RBP	10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	SLC2A8	Q9NY64	477 aa		10.41	□□□□□ -0.74
RAB5A-208	ENST00000476544	COL7A1	Q02388	2944 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	DISC1	C4P0D8	188 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	PPP5D1	E7EU14	171 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	OR2C1	O95371	312 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	CDS2	O95674	445 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	EDN2	P20800	178 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	ZP3	P21754	424 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	UCP1	P25874	307 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	DEFB121	Q5J5C9	76 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	GDPD1	Q8N9F7	314 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	PRND	Q9UKY0	176 aa		10.4	□□□□□ -0.74
RAB5A-208	ENST00000476544	C15orf61	A6NNL5	157 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544		F8W735	103 aa	Predicted RBP	10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	SAP30	O75446	220 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	SNAPC5	O75971	98 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	IGLV1-51	P01701	117 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	CLEC3B	P05452	202 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	SPN	P16150	400 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	S100G	P29377	79 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	HSPE1	P61604	102 aa	Known RBP	10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	SURF2	Q15527	256 aa	Predicted RBP	10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	PYDC2	Q56P42	97 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	CLEC19A	Q6UXS0	136 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	H2BFWT	Q7Z2G1	175 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	OR9G4	Q8NGQ1	327 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	ZNF502	Q8TBZ5	544 aa		10.39	□□□□□ -0.75
RAB5A-208	ENST00000476544	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	CRYM-AS1	A6NIL9	109 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	OR5AC1	P0C628	307 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	HIST1H1B	P16401	226 aa	Known RBP	10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	SUPT4H1	P63272	117 aa	Known RBP	10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	BAK1	Q16611	211 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	SELENOH	Q8IZQ5	122 aa	Known RBP	10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544		Q8N1Y9	231 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544		Q8N402	240 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	OR5B3	Q8NH48	314 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	HINT2	Q9BX68	163 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	SRR	Q9GZT4	340 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	TMEM222	Q9H0R3	208 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	PRR13	Q9NZ81	148 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	COPZ2	Q9P299	210 aa		10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	F11R	Q9Y624	299 aa	Known RBP	10.38	□□□□□ -0.75
RAB5A-208	ENST00000476544	IZUMO1R	A6ND01	250 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544		K7EIM0	57 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	DEFA4	P12838	97 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	TMEM187	Q14656	261 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	PVRIG	Q6DKI7	326 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	SLC25A24	Q6NUK1	477 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	GPHB5	Q86YW7	130 aa		10.37	□□□□□ -0.75
RAB5A-208	ENST00000476544	OR2C3	Q8N628	320 aa		10.37	□□□□□ -0.75

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