RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.31
VARS2-207ENST00000476162 DNAJC4Q9NNZ3 241 aa13.15□□□□□ -0.31
VARS2-207ENST00000476162 SLC39A9Q9NUM3 307 aa13.15□□□□□ -0.31
VARS2-207ENST00000476162 DSCAML1Q8TD84 2053 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 RAI1Q7Z5J4 1906 aaPredicted RBP13.14□□□□□ -0.31
VARS2-207ENST00000476162 C17orf100A8MU93 164 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 K7ENP7 123 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
VARS2-207ENST00000476162 TMPRSS2O15393 492 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 MMP23AO75900 390 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 OR10J1P30954 320 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 RAB11AP62491 216 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 TEX36Q5VZQ5 186 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 LYG1Q8N1E2 194 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 NAGKQ9UJ70 344 aa13.14□□□□□ -0.31
VARS2-207ENST00000476162 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
VARS2-207ENST00000476162 TNFRSF1AP19438 455 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 KIR2DS2P43631 304 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 RELBQ01201 579 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 OR4S2Q8NH73 311 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 LHX4Q969G2 390 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 FFAR4Q5NUL3 377 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 SLC25A22Q9H936 323 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 IDI2-AS1Q9NZ38 188 aa13.13□□□□□ -0.31
VARS2-207ENST00000476162 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.12□□□□□ -0.31
VARS2-207ENST00000476162 ZNF439Q8NDP4 499 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 OR10G9Q8NGN4 311 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 OR10G7Q8NGN6 311 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 TLE1Q04724 770 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 GBGT1Q8N5D6 347 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 ZNF709Q8N972 641 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 CORO2AQ92828 525 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 LINC00574Q9H8X3 128 aa13.12□□□□□ -0.31
VARS2-207ENST00000476162 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
VARS2-207ENST00000476162 TANC2Q9HCD6 1990 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 RRHO14718 337 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 FAM87AP0C7U9 286 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 VDAC2P45880 294 aaPredicted RBP13.11□□□□□ -0.31
VARS2-207ENST00000476162 THBS3P49746 956 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 WFIKKN1Q96NZ8 548 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 C20orf144Q9BQM9 153 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 CD1BP29016 333 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 PDLIM3Q53GG5 364 aaPredicted RBP13.11□□□□□ -0.31
VARS2-207ENST00000476162 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
VARS2-207ENST00000476162 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 ZNRD1Q9P1U0 126 aa13.11□□□□□ -0.31
VARS2-207ENST00000476162 RPUSD1Q9UJJ7 312 aaKnown RBP13.11□□□□□ -0.31
VARS2-207ENST00000476162 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 hADV38S2A0JD32 116 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 GFRA3O60609 400 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 IFNA1P01562 189 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 TMEM241Q24JQ0 296 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 COL5A1-AS1Q5SY13 56 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 ETFRF1Q6IPR1 90 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 Q8N7P7 452 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 P2RX4Q99571 388 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 SAP30LQ9HAJ7 183 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 SLC25A10Q9UBX3 287 aaPredicted RBP13.1□□□□□ -0.31
VARS2-207ENST00000476162 TCF19Q9Y242 345 aa13.1□□□□□ -0.31
VARS2-207ENST00000476162 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 NKX6-3A6NJ46 265 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 DEFA4P12838 97 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 TFPI2P48307 235 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 SELENOTP62341 195 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 OR4A47Q6IF82 309 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 TMEM37Q8WXS4 190 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
VARS2-207ENST00000476162 TBX15Q96SF7 602 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 ELOVL1Q9BW60 279 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 AURKAIP1Q9NWT8 199 aaPredicted RBP13.09□□□□□ -0.31
VARS2-207ENST00000476162 WDR83OSQ9Y284 106 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 C17orf112F2Z3M2 114 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 SLC25A48Q6ZT89 311 aaKnown RBP13.09□□□□□ -0.31
VARS2-207ENST00000476162 CCL17Q92583 94 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 RND1Q92730 232 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 ADTRPQ96IZ2 230 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 LINC00312Q9Y6C7 94 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 PKDREJQ9NTG1 2253 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 TET2Q6N021 2002 aaPredicted RBP13.09□□□□□ -0.31
VARS2-207ENST00000476162 PTPRQQ9UMZ3 2332 aa13.09□□□□□ -0.31
VARS2-207ENST00000476162 FAM3BP58499 235 aaPredicted RBP13.08□□□□□ -0.32
VARS2-207ENST00000476162 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
VARS2-207ENST00000476162 TLN1Q9Y490 2541 aaKnown RBP13.08□□□□□ -0.32
VARS2-207ENST00000476162 KALRNO60229 2985 aa13.08□□□□□ -0.32
VARS2-207ENST00000476162 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
VARS2-207ENST00000476162 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
VARS2-207ENST00000476162 K7EP13 123 aa13.08□□□□□ -0.32
VARS2-207ENST00000476162 FCN3O75636 299 aa13.08□□□□□ -0.32
VARS2-207ENST00000476162 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
VARS2-207ENST00000476162 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
VARS2-207ENST00000476162 CHRNB4P30926 498 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms