RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TCL1AP56279 114 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 MAGOHP61326 146 aaKnown RBP0.97□□□□□ -2.25
LTN1-204ENST00000475344 NAA20P61599 178 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 ARHGAP11BQ3KRB8 267 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 GLT8D1Q68CQ7 371 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 CD200R1LQ6Q8B3 271 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 C7orf65Q6ZTY9 151 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 FP248Q71RG6 208 aaPredicted RBP0.97□□□□□ -2.25
LTN1-204ENST00000475344 DEFB125Q8N687 156 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 OR2T4Q8NH00 348 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 ACOT12Q8WYK0 555 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 ANKRD7Q92527 254 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 PTH2Q96A98 100 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 OPTNQ96CV9 577 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 NAT8Q9UHE5 227 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 ALPK2Q86TB3 2170 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 TRBV10-2A0A0K0K1G8 114 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 ACOX3O15254 700 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 PPBPP02775 128 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 ISG15P05161 165 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 SULT1A3P0DMM9 295 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 SULT1A4P0DMN0 295 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 KCNE1P15382 129 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 S100A7P31151 101 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 AP2S1P53680 142 aaPredicted RBP0.96□□□□□ -2.26
LTN1-204ENST00000475344 FXYD2P54710 66 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 AQP4P55087 323 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 OR4D2P58180 307 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 RAB5BP61020 215 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 MOGQ16653 247 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 IQCF2Q8IXL9 164 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 C10orf67Q8IYJ2 551 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 OR1M1Q8NGA1 313 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 OR51D1Q8NGF3 324 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 OR5B17Q8NGF7 314 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 PARD6GQ9BYG4 376 aaPredicted RBP0.96□□□□□ -2.26
LTN1-204ENST00000475344 OR8D2Q9GZM6 311 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 FAM96AQ9H5X1 160 aa0.96□□□□□ -2.26
LTN1-204ENST00000475344 PAQR5Q9NXK6 330 aaPredicted RBP0.96□□□□□ -2.26
LTN1-204ENST00000475344 POLEQ07864 2286 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 KIF13BQ9NQT8 1826 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 IGKV3-7A0A075B6H7 116 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 TGIF2-C20orf24A0A0A6YYL0 155 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 IRGMA1A4Y4 181 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 TRAPPC2LH3BP13 241 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 SLC22A1O15245 554 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 ORC5O43913 435 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 DCTN3O75935 186 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 METTL15P1P0C7V9 234 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 FAM228BP0C875 321 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 TRGC1P0CF51 173 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 HLA-DMBP28068 263 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 G6PCP35575 357 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 COQ5Q5HYK3 327 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 ALKAL1Q6UXT8 129 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 DHFR2Q86XF0 187 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 ZNF676Q8N7Q3 588 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 KLK6Q92876 244 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 ERMAPQ96PL5 475 aaPredicted RBP0.95□□□□□ -2.26
LTN1-204ENST00000475344 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 NOSIPQ9Y314 301 aaKnown RBP0.95□□□□□ -2.26
LTN1-204ENST00000475344 TIMM22Q9Y584 194 aa0.95□□□□□ -2.26
LTN1-204ENST00000475344 PLXND1Q9Y4D7 1925 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 NCOA6Q14686 2063 aaPredicted RBP0.94□□□□□ -2.26
LTN1-204ENST00000475344 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 CALB1P05937 261 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 KRT7P08729 469 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 RPL18Q07020 188 aaKnown RBP0.94□□□□□ -2.26
LTN1-204ENST00000475344 GUK1Q16774 197 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 IBA57Q5T440 356 aaKnown RBP0.94□□□□□ -2.26
LTN1-204ENST00000475344 FAM27BQ5VT28 67 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 C8orf74Q6P047 294 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 C9orf163Q8N9P6 203 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 OR8B3Q8NGG8 313 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 CNBD2Q96M20 576 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 ADAT1Q9BUB4 502 aaKnown RBP0.94□□□□□ -2.26
LTN1-204ENST00000475344 CISHQ9NSE2 258 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 LHFPL6Q9Y693 200 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 DOCK3Q8IZD9 2030 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 EXPH5Q8NEV8 1989 aa0.94□□□□□ -2.26
LTN1-204ENST00000475344 ZNF106Q9H2Y7 1883 aaKnown RBP0.93□□□□□ -2.26
LTN1-204ENST00000475344 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.93□□□□□ -2.26
LTN1-204ENST00000475344 IBA57-AS1B1ANH7 110 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 KCNK1O00180 336 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 SDCBPO00560 298 aaPredicted RBP0.93□□□□□ -2.26
LTN1-204ENST00000475344 NIPSNAP2O75323 286 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 IFNA5P01569 189 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 OR5G3P0C626 314 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 NKX2-5P52952 324 aaPredicted RBP0.93□□□□□ -2.26
LTN1-204ENST00000475344 CCL20P78556 96 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 PMAIP1Q13794 54 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 HIST3H3Q16695 136 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 FAM173BQ6P4H8 233 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 TMEM86BQ8N661 226 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 CMTM6Q9NX76 183 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 IL36BQ9NZH7 164 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 GUCA1BQ9UMX6 200 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 LSM5Q9Y4Y9 91 aaKnown RBP0.93□□□□□ -2.26
LTN1-204ENST00000475344 EML6Q6ZMW3 1958 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms