RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 A8MXE2 369 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 GPX1P07203 203 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 OR5G3P0C626 314 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 MEOX1P50221 254 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 UNQ5815/PRO19632Q6UWF5 114 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 V9GYV3 84 aa11.33□□□□□ -0.6
SEMA4D-217ENST00000475255 RNFT1Q5M7Z0 435 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 ACP7Q6ZNF0 438 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 ETFRF1Q6IPR1 90 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 RAB1CQ92928 201 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 ST6GALNAC6Q969X2 333 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 TCF19Q9Y242 345 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 VDAC2P45880 294 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 ZNF83P51522 516 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 HES3Q5TGS1 186 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 WDR82Q6UXN9 313 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 CDX2Q99626 313 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
SEMA4D-217ENST00000475255 PTPRBP23467 1997 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 NAV3Q8IVL0 2385 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 C20orf202A1L168 122 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 GNG4P50150 75 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 FAM201AQ5SY85 155 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 INTS1Q8N201 2190 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 A0A1W2PS18 150 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 OR7C2O60412 319 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 IGHV1-2P23083 117 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 CNEP1R1Q8N9A8 125 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 FAM168AQ92567 244 aa11.31□□□□□ -0.6
SEMA4D-217ENST00000475255 HELTA6NFD8 242 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 SPINT2O43291 252 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 RELBQ01201 579 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 ZNRD1Q9P1U0 126 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 SPRR3Q9UBC9 169 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 LAMA5O15230 3695 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 NDUFB8O95169 186 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 CA2P00918 260 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 C3orf79P0CE67 100 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 ERVK-16P61578 105 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 SPRNQ5BIV9 151 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
SEMA4D-217ENST00000475255 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 HYPMO75409 117 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 Q56UQ5 140 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 LHFPL4Q7Z7J7 247 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 GPR6P46095 362 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 RHOBP62745 196 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 MRPL49Q13405 166 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 BMPR1BO00238 502 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 S1PR3Q99500 378 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 PLEKHA3Q9HB20 300 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
SEMA4D-217ENST00000475255 GVINP1Q7Z2Y8 2422 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 C9orf172C9J069 976 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 H0Y8G0 127 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 CCL25O15444 150 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 NPY1RP25929 384 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 DYSFO75923 2080 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 IQCF6A8MYZ5 107 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 MORN2Q502X0 79 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 RNF2Q99496 336 aa11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-217ENST00000475255 DMXL2Q8TDJ6 3036 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 DPRXA6NFQ7 191 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 GGTLC3B5MD39 225 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 CER1O95813 267 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 SP1P08047 785 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 CD24P25063 80 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 PRDX2P32119 198 aa11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-217ENST00000475255 SLAQ13239 276 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms