RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WDR82Q6UXN9 313 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 CYP2G1PQ6ZSU1 146 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 MRPL13Q9BYD1 178 aaKnown RBP9.3□□□□□ -0.92
VAPB-204ENST00000475243 ELOVL5Q9NYP7 299 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FOLR2P14207 255 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 TNS1Q9HBL0 1735 aaKnown RBP9.29□□□□□ -0.92
VAPB-204ENST00000475243 IGHMP01871 453 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 MT-ND6P03923 174 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 TEX29Q8N6K0 151 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 FAM168AQ92567 244 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 CD24P25063 80 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 TMEM170BQ5T4T1 132 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 CLEC19AQ6UXS0 136 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 CLDND2Q8NHS1 167 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 FOXC2Q99958 501 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 A0A1W2PR77 199 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 NAT1P18440 290 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
VAPB-204ENST00000475243 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 SMIM8Q96KF7 97 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 CBLN1P23435 193 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 UNQ9370/PRO34162Q6UXP9 181 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 ZNF837Q96EG3 531 aaPredicted RBP9.29□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 SIAH2O43255 324 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 CGAP01215 116 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 FOXA3P55318 350 aaPredicted RBP9.29□□□□□ -0.92
VAPB-204ENST00000475243 FAM216BQ8N7L0 139 aa9.29□□□□□ -0.92
VAPB-204ENST00000475243 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 ZCCHC24Q8N2G6 241 aaKnown RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 CHRNA10Q9GZZ6 450 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 COX5BP10606 129 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 GCHFRP30047 84 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 MPTX1A8MV57 137 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 IGHV3-11P01762 117 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 IGFBP2P18065 325 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 FBXL7Q9UJT9 491 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 IGKV3D-20A0A0C4DH25 116 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 CDKN1AP38936 164 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 TGFAP01135 160 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 IGHV1-2P23083 117 aa9.28□□□□□ -0.92
VAPB-204ENST00000475243 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
VAPB-204ENST00000475243 TFF3Q07654 80 aa9.27□□□□□ -0.92
VAPB-204ENST00000475243 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.92
VAPB-204ENST00000475243 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 TFF1P04155 84 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 SLC17A3O00476 420 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 DANCRP0C864 163 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 C11orf44Q8N8P7 122 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 ZNF407Q9C0G0 2248 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 C17orf98A8MV24 154 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 HLA-DRB1P01911 266 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 ZP1P60852 638 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 TRAV24A0A0B4J272 114 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 TMEM14DPA8MWL7 114 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 GATA2P23769 480 aaPredicted RBP9.27□□□□□ -0.93
VAPB-204ENST00000475243 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 OR10S1Q8NGN2 331 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 SELENOKQ9Y6D0 94 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 SNAI2O43623 268 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 CACNG7P62955 275 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 KCNS1Q96KK3 526 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 DPM3Q9P2X0 92 aa9.27□□□□□ -0.93
VAPB-204ENST00000475243 IL6RP08887 468 aaPredicted RBP9.26□□□□□ -0.93
VAPB-204ENST00000475243 PSG7Q13046 419 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 CD200R1LQ6Q8B3 271 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 HELZP42694 1942 aaKnown RBP9.26□□□□□ -0.93
VAPB-204ENST00000475243 MSGN1A6NI15 193 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 CSRP2Q16527 193 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 PPP1R27Q86WC6 154 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 ST6GALNAC3Q8NDV1 305 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 LINC00470Q9BZP3 86 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
VAPB-204ENST00000475243 ZNF506Q5JVG8 444 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 FAM209AQ5JX71 171 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 RPRMQ9NS64 109 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TGFBR3LH3BV60 316 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 DNAL4O96015 105 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 C12orf54Q6X4T0 127 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TXNDC17Q9BRA2 123 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 MRPL32Q9BYC8 188 aaKnown RBP9.26□□□□□ -0.93
VAPB-204ENST00000475243 WNT10AQ9GZT5 417 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 ZNF708P17019 499 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TNFSF10P50591 281 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 C10orf128Q5T292 105 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms