RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 SCGB1D2O95969 90 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 IFNA17P01571 189 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 HLA-DRB1P01911 266 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 OPN1MWP04001 364 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 FGF2P09038 288 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 OPN1MW2P0DN77 364 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 OPN1MW3P0DN78 364 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 NKX2-1P43699 371 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 COMPP49747 757 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 RAP2BP61225 183 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 HSPE1P61604 102 aaKnown RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 GNB1P62873 340 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 TNFRSF9Q07011 255 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 FXYD3Q14802 87 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 AARDQ4LEZ3 155 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 C10orf55Q5SWW7 151 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 ZNF562Q6V9R5 426 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 OR52E5Q8NH55 327 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 HSPB9Q9BQS6 159 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 COMMD5Q9GZQ3 224 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 RANGRFQ9HD47 186 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 HSPB7Q9UBY9 170 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 PAIP2BQ9ULR5 123 aaKnown RBP7.53□□□□□ -1.2
DDX39B-217ENST00000474961 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
DDX39B-217ENST00000474961 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 A0A1B0GW64 132 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 CGB1A6NKQ9 187 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 FAM90A26D6RGX4 464 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 E7EUB6 86 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 CLDN34H7C241 214 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 K7EPK0 472 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 HILS1P60008 231 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 SPCS3P61009 180 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 POLR2GP62487 172 aaKnown RBP eCLIP7.52□□□□□ -1.21
DDX39B-217ENST00000474961 BLCAPP62952 87 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 CX3CL1P78423 397 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 NDPQ00604 133 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 RAB32Q13637 225 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 SPINK9Q5DT21 86 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 C9orf152Q5JTZ5 239 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 AKAP14Q86UN6 197 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 OR5B3Q8NH48 314 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 PPP1R1CQ8WVI7 109 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
DDX39B-217ENST00000474961 ASB13Q8WXK3 278 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 MAGT1Q9H0U3 335 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 RBKSQ9H477 322 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 CACFD1Q9UGQ2 172 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 LSM5Q9Y4Y9 91 aaKnown RBP7.52□□□□□ -1.21
DDX39B-217ENST00000474961 U3KQE9 123 aa7.52□□□□□ -1.21
DDX39B-217ENST00000474961 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
DDX39B-217ENST00000474961 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 LINC01548A6NM66 108 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 CEBPZOSA8MTT3 80 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 WRBO00258 174 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 SYNGR2O43760 224 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 MED6O75586 246 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 RNASE1P07998 156 aaKnown RBP7.51□□□□□ -1.21
DDX39B-217ENST00000474961 PSMB6P28072 239 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 S100A10P60903 97 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 UBA52P62987 128 aaKnown RBP7.51□□□□□ -1.21
DDX39B-217ENST00000474961 PRCDQ00LT1 54 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 LRRC37A5PQ49AS3 106 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 PDLIM3Q53GG5 364 aaPredicted RBP7.51□□□□□ -1.21
DDX39B-217ENST00000474961 Q5BKY6 102 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 OR10W1Q8NGF6 305 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 GRPEL2Q8TAA5 225 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 ABHD5Q8WTS1 349 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 ARPC1AQ92747 370 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 NEURL2Q9BR09 285 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 NDUFA4L2Q9NRX3 87 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 ZFP57Q9NU63 452 aa7.51□□□□□ -1.21
DDX39B-217ENST00000474961 RCL1Q9Y2P8 373 aaKnown RBP7.51□□□□□ -1.21
DDX39B-217ENST00000474961 TRAV14DV4A0A0A6YYC5 116 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 A0A1W2PN81 502 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 TEX22C9J3V5 150 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 H0YIZ8 118 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 TCF21O43680 179 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 SSSCA1O60232 199 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 ATP6V1G1O75348 118 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 MPC2O95563 127 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 IGHG2P01859 326 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 APELAP0DMC3 54 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 IAPPP10997 89 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 EGR2P11161 476 aaPredicted RBP7.5□□□□□ -1.21
DDX39B-217ENST00000474961 CHRNA7P36544 502 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 VDAC2P45880 294 aaPredicted RBP7.5□□□□□ -1.21
DDX39B-217ENST00000474961 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
DDX39B-217ENST00000474961 CD300CQ08708 224 aa7.5□□□□□ -1.21
DDX39B-217ENST00000474961 SLC35E3Q7Z769 313 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms