RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
ITGB1-210ENST00000474568 RND3P61587 244 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 SSBP1Q04837 148 aaKnown RBP12.23□□□□□ -0.45
ITGB1-210ENST00000474568 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 SP6Q3SY56 376 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 CLEC19AQ6UXS0 136 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 OR6Q1Q8NGQ2 317 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 SEC22AQ96IW7 307 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 ZC4H2Q9NQZ6 224 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 COPZ2Q9P299 210 aa12.23□□□□□ -0.45
ITGB1-210ENST00000474568 IGLV11-55A0A075B6I3 123 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 IGHV3-21A0A0B4J1V1 117 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 DISC1C4P0D8 188 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 HIST1H1BP16401 226 aaKnown RBP12.22□□□□□ -0.45
ITGB1-210ENST00000474568 WT1-ASQ06250 92 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 CD69Q07108 199 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 MEF2DQ14814 521 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 TATDN3Q17R31 274 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 IL34Q6ZMJ4 242 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 ZNF486Q96H40 463 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-210ENST00000474568 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 NXF2Q9GZY0 626 aaKnown RBP12.22□□□□□ -0.45
ITGB1-210ENST00000474568 RBM38Q9H0Z9 239 aaKnown RBP12.22□□□□□ -0.45
ITGB1-210ENST00000474568 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 RSL24D1Q9UHA3 163 aaKnown RBP12.22□□□□□ -0.45
ITGB1-210ENST00000474568 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
ITGB1-210ENST00000474568 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 H0Y980 276 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 OR2C1O95371 312 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 ARL3P36405 182 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 OR4A16Q8NH70 328 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 LSM10Q969L4 123 aaKnown RBP12.21□□□□□ -0.45
ITGB1-210ENST00000474568 TSC22D3Q99576 134 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
ITGB1-210ENST00000474568 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
ITGB1-210ENST00000474568 RABL2AQ9UBK7 228 aaPredicted RBP12.21□□□□□ -0.45
ITGB1-210ENST00000474568 RABL2BQ9UNT1 228 aa12.21□□□□□ -0.45
ITGB1-210ENST00000474568 LSM4Q9Y4Z0 139 aaKnown RBP12.21□□□□□ -0.45
ITGB1-210ENST00000474568 GSTZ1O43708 216 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-210ENST00000474568 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-210ENST00000474568 CSN3P07498 182 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 GP9P14770 177 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 EDN2P20800 178 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 PTBP1P26599 531 aaKnown RBP eCLIP12.2□□□□□ -0.462e-10■■■□□ 15.4
ITGB1-210ENST00000474568 PYDC2Q56P42 97 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 C11orf87Q6NUJ2 197 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 OR51S1Q8NGJ8 323 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 SOSTQ9BQB4 213 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
ITGB1-210ENST00000474568 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
ITGB1-210ENST00000474568 ANKRD20A5PA0PJZ0 165 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
ITGB1-210ENST00000474568 IGKV1-5P01602 117 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 FGF2P09038 288 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 GPR183P32249 361 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 AKR1C2P52895 323 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 MFAP2P55001 183 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
ITGB1-210ENST00000474568 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
ITGB1-210ENST00000474568 OR5B3Q8NH48 314 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 ASCL2Q99929 193 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 FKBP11Q9NYL4 201 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
ITGB1-210ENST00000474568 IGHV3-35A0A0C4DH35 117 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 TEX13DA0A0J9YY54 714 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-210ENST00000474568 CLEC3BP05452 202 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
ITGB1-210ENST00000474568 CXorf58Q96LI9 332 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-210ENST00000474568 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
ITGB1-210ENST00000474568 C5orf66Q9H5L9 145 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
ITGB1-210ENST00000474568 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
ITGB1-210ENST00000474568 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
ITGB1-210ENST00000474568 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
ITGB1-210ENST00000474568 OR5AC1P0C628 307 aa12.17□□□□□ -0.46
ITGB1-210ENST00000474568 S100A5P33763 92 aa12.17□□□□□ -0.46
ITGB1-210ENST00000474568 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
ITGB1-210ENST00000474568 CADM3Q8N126 398 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms