RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 DHFRP00374 187 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 HPRT1P00492 218 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 IFNA6P05013 189 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 NQO2P16083 231 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 HIST1H1BP16401 226 aaKnown RBP6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 TAS2R31P59538 309 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 CATR1Q13166 79 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 KCTD21Q4G0X4 260 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 GIMAP1Q8WWP7 306 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 SRD5A3Q9H8P0 318 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 MLXQ9UH92 298 aa6.59□□□□□ -1.35
TNFRSF9-202ENST00000474475 TRBV7-1A0A0A6YYK4 115 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 XRCC3O43542 346 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 S1PR2O95136 353 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 CLEC3BP05452 202 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 DEFA4P12838 97 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 RPA2P15927 270 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 GNRHRP30968 328 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 CBX5P45973 191 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 FAM106AQ4KMX7 169 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 AADACL3Q5VUY0 350 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 TMEM17Q86X19 198 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 UXS1Q8NBZ7 420 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 OR10W1Q8NGF6 305 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 ZNF502Q8TBZ5 544 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 CXorf58Q96LI9 332 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 COMMD5Q9GZQ3 224 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 PLEKHA2Q9HB19 425 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 TMEM140Q9NV12 185 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 ANAPC10Q9UM13 185 aa6.58□□□□□ -1.36
TNFRSF9-202ENST00000474475 TMEM127O75204 238 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 FGF2P09038 288 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 GPR183P32249 361 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 RPS19P39019 145 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 RFX2P48378 723 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 TAS2R20P59543 309 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 HERV-K104P61576 105 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 UBE2NLQ5JXB2 153 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 ZNF57Q68EA5 555 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 DHRS11Q6UWP2 260 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 BTNL8Q6UX41 500 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 DMBX1Q8NFW5 382 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 MOB3AQ96BX8 217 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 YIPF6Q96EC8 236 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 S100A16Q96FQ6 103 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 SRSF8Q9BRL6 282 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 ZNF2Q9BSG1 426 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 QTRT1Q9BXR0 403 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 IFT46Q9NQC8 304 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 EHFQ9NZC4 300 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 COMMD9Q9P000 198 aa6.57□□□□□ -1.36
TNFRSF9-202ENST00000474475 IGHV3-35A0A0C4DH35 117 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 TEX50A0A1B0GTY4 177 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 MARCH11A6NNE9 402 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 PAX4O43316 350 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 PGLYRP1O75594 196 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 PMP2P02689 132 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 RLN1P04808 185 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 C8orf88P0DMB2 117 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 OR13C7P0DN81 318 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 F2RP25116 425 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 PTBP1P26599 531 aaKnown RBP eCLIP6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 LPAR6P43657 344 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 MFAP2P55001 183 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 LSM3P62310 102 aaKnown RBP6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 ZNF585BQ52M93 769 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 TMEM69Q5SWH9 247 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 SLC16A13Q7RTY0 426 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 CROCCP3Q8IVE0 287 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 SAMD12Q8N8I0 201 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 GDPD1Q8N9F7 314 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 OR52B4Q8NGK2 314 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 CD300LFQ8TDQ1 290 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 FCAMRQ8WWV6 532 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 ZNF436Q9C0F3 470 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
TNFRSF9-202ENST00000474475 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 TGOLN2O43493 480 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 KRASP01116 189 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 EIF4EP06730 217 aaKnown RBP6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 SERPINE2P07093 398 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 TRAPPC2P0DI81 140 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 TRAPPC2BP0DI82 140 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 G6PCP35575 357 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 ELLP55199 621 aaPredicted RBP6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 TAS2R46P59540 309 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 ERVK-16P61578 105 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 KIR3DS1Q14943 382 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 THOC7Q6I9Y2 204 aaKnown RBP6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 PLET1Q6UQ28 207 aa6.55□□□□□ -1.36
TNFRSF9-202ENST00000474475 LYSMD2Q8IV50 215 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms