RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 SCP2D1Q9UJQ7 156 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 TEX13DA0A0J9YY54 714 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-203ENST00000474047 C3orf85A0A1B0GTC6 90 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 A0A1B0GW64 132 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 ANKRD20A5PA0PJZ0 165 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 H0Y980 276 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 LY86O95711 162 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 CRYGCP07315 174 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 CTSDP07339 412 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-203ENST00000474047 TRIM16LQ309B1 348 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-203ENST00000474047 MRGPRFQ96AM1 343 aa10.94□□□□□ -0.66
VAMP4-203ENST00000474047 WI2-2373I1.2A0A1W2PRP0 233 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 OR13C7P0DN81 318 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 CTRB1P17538 263 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.66
VAMP4-203ENST00000474047 AKR1C2P52895 323 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 SPANXN2Q5MJ10 180 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 CTRB2Q6GPI1 263 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 C19orf35Q6ZS72 473 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 CADM3Q8N126 398 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 OR10W1Q8NGF6 305 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 OR51S1Q8NGJ8 323 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 RNASE11Q8TAA1 199 aaKnown RBP10.93□□□□□ -0.66
VAMP4-203ENST00000474047 TMEM56Q96MV1 263 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 SOSTQ9BQB4 213 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 THYN1Q9P016 225 aa10.93□□□□□ -0.66
VAMP4-203ENST00000474047 CGB1A6NKQ9 187 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 FAUP35544 74 aaKnown RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 AP3S2P59780 193 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SURF2Q15527 256 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SP6Q3SY56 376 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 ACSM6Q6P461 480 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 Q8N402 240 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 LSM10Q969L4 123 aaKnown RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 EEF1AKMT3Q96AZ1 226 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SEC22AQ96IW7 307 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 TP53RKQ96S44 253 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 NDUFA13Q9P0J0 144 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 K7EIL1 84 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 NDUFB8O95169 186 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 DCTN2Q13561 401 aaKnown RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 KLF5Q13887 457 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 SLC25A24Q6NUK1 477 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 TOMM5Q8N4H5 51 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 OR5B3Q8NH48 314 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 RRNAD1Q96FB5 475 aaKnown RBP10.92□□□□□ -0.66
VAMP4-203ENST00000474047 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 S4R3C0 116 aa10.92□□□□□ -0.66
VAMP4-203ENST00000474047 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 IGKV1-39P01597 117 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 IGHV3-23P01764 117 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 IGKV1D-39P04432 117 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 OR6Q1Q8NGQ2 317 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 CXorf58Q96LI9 332 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
VAMP4-203ENST00000474047 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
VAMP4-203ENST00000474047 INPP1P49441 399 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 GDPD1Q8N9F7 314 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 PRR25Q96S07 402 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
VAMP4-203ENST00000474047 PDCD10Q9BUL8 212 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 TMEM14BQ9NUH8 114 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 PEMTQ9UBM1 199 aa10.9□□□□□ -0.66
VAMP4-203ENST00000474047 IGLV11-55A0A075B6I3 123 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 TRBV7-1A0A0A6YYK4 115 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
VAMP4-203ENST00000474047 ARL3P36405 182 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 WT1-ASQ06250 92 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 CCDC190Q86UF4 302 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 SLC2A8Q9NY64 477 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 KCNIP3Q9Y2W7 256 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 V9GYH0 126 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 BMPR1BO00238 502 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 OR5AC1P0C628 307 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 DHODHQ02127 395 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 ZNF57Q68EA5 555 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-203ENST00000474047 OR1L6Q8NGR2 347 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 C5orf66Q9H5L9 145 aa10.89□□□□□ -0.67
VAMP4-203ENST00000474047 DBX1A6NMT0 343 aa10.88□□□□□ -0.67
VAMP4-203ENST00000474047 OR2C1O95371 312 aa10.88□□□□□ -0.67
VAMP4-203ENST00000474047 IFNA17P01571 189 aa10.88□□□□□ -0.67
VAMP4-203ENST00000474047 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
VAMP4-203ENST00000474047 UCP1P25874 307 aa10.88□□□□□ -0.67
VAMP4-203ENST00000474047 HSPE1P61604 102 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms