RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 MGST3O14880 152 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 PDE6DO43924 150 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 SCGB1D1O95968 90 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
C9orf3-214ENST00000473778 IRF2P14316 349 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 SRP14P37108 136 aaKnown RBP9□□□□□ -0.97
C9orf3-214ENST00000473778 ZNF83P51522 516 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 IGFL2Q6UWQ7 119 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 RNASE8Q8TDE3 154 aaKnown RBP9□□□□□ -0.97
C9orf3-214ENST00000473778 NCOR1P1Q9H4R4 102 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 KCNIP2Q9NS61 270 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 ZNRD1Q9P1U0 126 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 CEP250Q9BV73 2442 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 ROS1P08922 2347 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 CCKARP32238 428 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 OR5I1Q13606 314 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 BHLHA15Q7RTS1 189 aaPredicted RBP8.99□□□□□ -0.97
C9orf3-214ENST00000473778 MOB3BQ86TA1 216 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM256Q8N2U0 113 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 CISD2Q8N5K1 135 aaKnown RBP8.99□□□□□ -0.97
C9orf3-214ENST00000473778 DNAJC4Q9NNZ3 241 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 CALYQ9NYX4 217 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 POLR3KQ9Y2Y1 108 aaPredicted RBP8.99□□□□□ -0.97
C9orf3-214ENST00000473778 FAM90A9PA6NNJ1 464 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 K7EN84 100 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 SPRY3O43610 288 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 MMP23AO75900 390 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 LHBP01229 141 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 FRMD6-AS1P0C7T7 363 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM11P17152 192 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 CDKN1BP46527 198 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 THBS3P49746 956 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 HLA-DRB5Q30154 266 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 TRAT1Q6PIZ9 186 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 VHLLQ6RSH7 139 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 SGMS2Q8NHU3 365 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 SNRNP40Q96DI7 357 aaKnown RBP8.99□□□□□ -0.97
C9orf3-214ENST00000473778 ACY3Q96HD9 319 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 SFRP2Q96HF1 295 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 S1PR3Q99500 378 aa8.99□□□□□ -0.97
C9orf3-214ENST00000473778 A0A0U1RQK1 487 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 ZNF320A2RRD8 509 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 C15orf61A6NNL5 157 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 IL6RP08887 468 aaPredicted RBP8.98□□□□□ -0.97
C9orf3-214ENST00000473778 EFNB3Q15768 340 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 OR4A47Q6IF82 309 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 ZNF474Q6S9Z5 364 aaPredicted RBP8.98□□□□□ -0.97
C9orf3-214ENST00000473778 ITLN1Q8WWA0 313 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 ELOVL5Q9NYP7 299 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
C9orf3-214ENST00000473778 SPAARA0A1B0GVQ0 90 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 MPDU1O75352 247 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 CFHR2P36980 270 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 CNN1P51911 297 aaKnown RBP8.98□□□□□ -0.97
C9orf3-214ENST00000473778 LCN2P80188 198 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 BATFQ16520 125 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 STPG3Q8N7X2 389 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 SARAFQ96BY9 339 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
C9orf3-214ENST00000473778 IGKV1OR2-108A0A075B7D4 117 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 A8MXE2 369 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 M0R1B8 84 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 CD99P14209 185 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TIMP3P35625 211 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 ERVK-16P61578 105 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 RPL31P62899 125 aaKnown RBP8.97□□□□□ -0.97
C9orf3-214ENST00000473778 FOXL1Q12952 345 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 GBGT1Q8N5D6 347 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 C11orf42Q8N5U0 333 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM14BQ9NUH8 114 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 ZFP30Q9Y2G7 519 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 DYSFO75923 2080 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TRAV17A0A0B4J275 112 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TRGV8A0A0C4DH27 118 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 SLC17A3O00476 420 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 CXorf1O96002 111 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 CA2P00918 260 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 IGKV1-16P04430 117 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 IGFBP2P18065 325 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 CD33P20138 364 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 OR10J1P30954 320 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 KCNIP4Q6PIL6 250 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 ZCCHC14Q8WYQ9 949 aaKnown RBP8.97□□□□□ -0.97
C9orf3-214ENST00000473778 NPVFQ9HCQ7 196 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TUBG2Q9NRH3 451 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 IDI2-AS1Q9NZ38 188 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 NAGKQ9UJ70 344 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TP53TG3Q9ULZ0 132 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 TRAPPC1Q9Y5R8 145 aa8.97□□□□□ -0.97
C9orf3-214ENST00000473778 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
C9orf3-214ENST00000473778 NAV3Q8IVL0 2385 aa8.96□□□□□ -0.98
C9orf3-214ENST00000473778 GRIFINA4D1Z8 144 aa8.96□□□□□ -0.98
C9orf3-214ENST00000473778 SRRM4A7MD48 611 aaKnown RBP8.96□□□□□ -0.98
C9orf3-214ENST00000473778 GCHFRP30047 84 aa8.96□□□□□ -0.98
C9orf3-214ENST00000473778 ADMP35318 185 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms