RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RPL8P62917 257 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 SSX2Q16385 188 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 HAGHQ16775 308 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 MRGPRG-AS1Q2M3A8 158 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 IL34Q6ZMJ4 242 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 TNFRSF14Q92956 283 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 COMMD5Q9GZQ3 224 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 ENY2Q9NPA8 101 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PRNDQ9UKY0 176 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 IGHV3OR16-10A0A075B7F0 116 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 hCG_1809904A0A1W2PP81 198 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 A0A1W2PPE2 198 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 A0A1W2PR64 198 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 A0A1W2PRV1 198 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 KRBOX1C9JBD0 128 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 FAM157AC9JC47 383 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PRSS46E5RG02 174 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 F8W036 122 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PRCDQ00LT1 54 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 GUK1Q16774 197 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 ARSJQ5FYB0 599 aaPredicted RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 BEND2Q8NDZ0 799 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 LYPD6BQ8NI32 183 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 SSMEM1Q8WWF3 244 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PINX1Q96BK5 328 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 C1orf159Q96HA4 380 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 SCRT1Q9BWW7 348 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 NPCDR1Q9BY65 106 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 EIF5A2Q9GZV4 153 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 SLC25A22Q9H936 323 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 CCDC168Q8NDH2 2452 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 IGHV4-61A0A0C4DH41 118 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 UMAD1C9J7I0 102 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 LY6LH3BQJ8 138 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 TRIM77I1YAP6 450 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 FCN1O00602 326 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 FBP1P09467 338 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 SFTA3P0C7M3 94 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 HTR1DP28221 377 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 CD1BP29016 333 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 RAB5CP51148 216 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 RAB13P51153 203 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 ATP5J2P56134 94 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 TLE4Q04727 773 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 WT1-ASQ06250 92 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PDLIM3Q53GG5 364 aaPredicted RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 TPTE2P1Q5T6R2 138 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 FAM71F2Q6NXP2 309 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 RPP25LQ8N5L8 163 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 MARVELD3Q96A59 401 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 RCC1LQ96I51 464 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 GCN1Q92616 2671 aaKnown RBP5□□□□□ -1.61
CLK1-210ENST00000473565 TLN2Q9Y4G6 2542 aa5□□□□□ -1.61
CLK1-210ENST00000473565 HOXB4P17483 251 aaPredicted RBP5□□□□□ -1.61
CLK1-210ENST00000473565 PRTN3P24158 256 aa5□□□□□ -1.61
CLK1-210ENST00000473565 CEBPGP53567 150 aa5□□□□□ -1.61
CLK1-210ENST00000473565 TNXAQ16473 311 aa5□□□□□ -1.61
CLK1-210ENST00000473565 FFAR4Q5NUL3 377 aa5□□□□□ -1.61
CLK1-210ENST00000473565 TREML4Q6UXN2 200 aa5□□□□□ -1.61
CLK1-210ENST00000473565 TMEM167AQ8TBQ9 72 aa5□□□□□ -1.61
CLK1-210ENST00000473565 AIFM2Q9BRQ8 373 aa5□□□□□ -1.61
CLK1-210ENST00000473565 IGHV4-30-2A0A087WSY4 118 aa5□□□□□ -1.61
CLK1-210ENST00000473565 IGHV3-21A0A0B4J1V1 117 aa5□□□□□ -1.61
CLK1-210ENST00000473565 RBP4P02753 201 aa5□□□□□ -1.61
CLK1-210ENST00000473565 CD5P06127 495 aa5□□□□□ -1.61
CLK1-210ENST00000473565 RNASE2P10153 161 aaKnown RBP5□□□□□ -1.61
CLK1-210ENST00000473565 USF1P22415 310 aaPredicted RBP5□□□□□ -1.61
CLK1-210ENST00000473565 GATA2P23769 480 aaPredicted RBP5□□□□□ -1.61
CLK1-210ENST00000473565 MC5RP33032 325 aa5□□□□□ -1.61
CLK1-210ENST00000473565 KRTAP10-9P60411 292 aa5□□□□□ -1.61
CLK1-210ENST00000473565 PAX2Q02962 417 aa5□□□□□ -1.61
CLK1-210ENST00000473565 BTN1A1Q13410 526 aa5□□□□□ -1.61
CLK1-210ENST00000473565 HES1Q14469 280 aa5□□□□□ -1.61
CLK1-210ENST00000473565 PSG5Q15238 335 aa5□□□□□ -1.61
CLK1-210ENST00000473565 AKIRIN2Q53H80 203 aa5□□□□□ -1.61
CLK1-210ENST00000473565 MIC13Q5XKP0 118 aa5□□□□□ -1.61
CLK1-210ENST00000473565 FAM122CQ6P4D5 195 aa5□□□□□ -1.61
CLK1-210ENST00000473565 OR1L8Q8NGR8 309 aa5□□□□□ -1.61
CLK1-210ENST00000473565 MGST2Q99735 147 aa5□□□□□ -1.61
CLK1-210ENST00000473565 PSMG3Q9BT73 122 aaPredicted RBP5□□□□□ -1.61
CLK1-210ENST00000473565 TMPRSS5Q9H3S3 457 aa5□□□□□ -1.61
CLK1-210ENST00000473565 NDUFA4L2Q9NRX3 87 aa5□□□□□ -1.61
CLK1-210ENST00000473565 DPM3Q9P2X0 92 aa5□□□□□ -1.61
CLK1-210ENST00000473565 METTL1Q9UBP6 276 aaKnown RBP5□□□□□ -1.61
CLK1-210ENST00000473565 WDR83OSQ9Y284 106 aa5□□□□□ -1.61
CLK1-210ENST00000473565 TEX15Q9BXT5 2789 aa5□□□□□ -1.61
CLK1-210ENST00000473565 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 M0R1W7 72 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 VENTXO95231 258 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR13C7P0DN81 318 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 AREGP15514 252 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 PDLIM4P50479 330 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 RAB11AP62491 216 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ATP6V1FQ16864 119 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 VWC2Q2TAL6 325 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 VMA21Q3ZAQ7 101 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 TMEM41BQ5BJD5 291 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 RUSC1-AS1Q66K80 236 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 SP5Q6BEB4 398 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms