RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 KIR2DS2P43631 304 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 FXYD3Q14802 87 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 TMEM164Q5U3C3 297 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 OR4S2Q8NH73 311 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 RNF2Q99496 336 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR14LQ5THK1 2151 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 TIGITQ495A1 244 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 CNEP1R1Q8N9A8 125 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 IFI27L2Q9H2X8 130 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 IL19Q9UHD0 177 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
NHLRC3-204ENST00000473371 COL27A1Q8IZC6 1860 aaPredicted RBP11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 CX3CL1P78423 397 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 FAM216AQ8WUB2 273 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 ZNF253O75346 499 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 TFPI2P48307 235 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR20EP86478 221 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR20CP86479 221 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR20DP86480 221 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR20BP86481 221 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PRR20AP86496 221 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 SPATA45Q537H7 98 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 ARL6IP6Q8N6S5 226 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 PPP1R35Q8TAP8 253 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 CORO2AQ92828 525 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 LEAP2Q969E1 77 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
NHLRC3-204ENST00000473371 COL5A1-AS1Q5SY13 56 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 OR4A47Q6IF82 309 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 TMEM136Q6ZRR5 245 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 Q6ZT83 130 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 UBALD2Q8IYN6 164 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 NABP2Q9BQ15 211 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 IGHV3OR15-7A0A075B7D8 119 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 MGST3O14880 152 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 OR10J4P0C629 311 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 LINC00614P0C842 121 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 LINC00869P0C866 280 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 MYOD1P15172 320 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 LOXL3P58215 753 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 C1orf174Q8IYL3 243 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 Q8N976 141 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 KCNS1Q96KK3 526 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 TRIB1Q96RU8 372 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 OSTCQ9NRP0 149 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
NHLRC3-204ENST00000473371 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 A0A1W2PNU3 283 aaPredicted RBP11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 OR7C2O60412 319 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 IGKV3-15P01624 115 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 OR5G3P0C626 314 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 COX19Q49B96 90 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 FAM214BQ7L5A3 538 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 OR2Z1Q8NG97 314 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 FAM122AQ96E09 287 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 RCHY1Q96PM5 261 aa11.71□□□□□ -0.54
NHLRC3-204ENST00000473371 A0A1W2PS18 150 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 CECR9P0C854 216 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 SRIP30626 198 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 DDB2Q92466 427 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 FER1L6-AS2Q96M78 137 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 ARL2-SNX15V9GYD0 113 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 KNTC1P50748 2209 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 DMDP11532 3685 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 AHRRA9YTQ3 701 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
NHLRC3-204ENST00000473371 SAA2-SAA4A0A096LPE2 208 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 F2RL2O00254 374 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 SFTPCP11686 197 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 RAB7AP51149 207 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 AMY1AP04745 511 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 RELQ04864 619 aaPredicted RBP11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 MMDQ15546 238 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 UTF1Q5T230 341 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 TXN2Q99757 166 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 IDI2-AS1Q9NZ38 188 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 OR51B2Q9Y5P1 312 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNF83P51522 516 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 IBA57Q5T440 356 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms