RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SERF1AO75920 110 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 NPY1RP25929 384 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 TDRG1Q3Y452 100 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 KRTCAP3Q53RY4 240 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 SEM1Q6ZVN7 128 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 OR1L6Q8NGR2 347 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 ZNF71Q9NQZ8 489 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-207ENST00000473212 OTOGLQ3ZCN5 2332 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 TRGV8A0A0C4DH27 118 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 C15orf61A6NNL5 157 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 SPRY3O43610 288 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 ACTL6BO94805 426 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 CGAP01215 116 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 IGFBP2P18065 325 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 RPL29P47914 159 aaKnown RBP17.35■□□□□ 0.37
COL18A1-207ENST00000473212 TPPP2P59282 170 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 OR5I1Q13606 314 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 SLC24A4Q8NFF2 622 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 DDB2Q92466 427 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 EAF1Q96JC9 268 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-207ENST00000473212 DSCAML1Q8TD84 2053 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 IER3P46695 156 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 MBNL2Q5VZF2 373 aaKnown RBP17.34■□□□□ 0.37
COL18A1-207ENST00000473212 OR4S2Q8NH73 311 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 F2Z2F3 143 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 FCN1O00602 326 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 CA2P00918 260 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 G0S2P27469 103 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 LGALS4P56470 323 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 OR4A47Q6IF82 309 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 MOB3BQ86TA1 216 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 UHRF2Q96PU4 802 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 HINT2Q9BX68 163 aa17.34■□□□□ 0.37
COL18A1-207ENST00000473212 F2RL2O00254 374 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 MT-CO2P00403 227 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 RAB4AP20338 218 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 ZNF705AQ6ZN79 300 aaPredicted RBP17.33■□□□□ 0.36
COL18A1-207ENST00000473212 MIR17HGQ75NE6 70 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 C11orf52Q96A22 123 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 HSPB9Q9BQS6 159 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 CALYQ9NYX4 217 aa17.33■□□□□ 0.36
COL18A1-207ENST00000473212 TRGV10A0A0A0MS01 117 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 A8MXE2 369 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 PRR33A8MZF0 331 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 KIR2DS2P43631 304 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 PAFAH1B2P68402 229 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 CR1LQ2VPA4 569 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 SNRNP40Q96DI7 357 aaKnown RBP17.32■□□□□ 0.36
COL18A1-207ENST00000473212 PLSCR4Q9NRQ2 329 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 SPAARA0A1B0GVQ0 90 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 AHRRA9YTQ3 701 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 C9JCJ5 164 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 TDGF1P3P51864 188 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 RAB31Q13636 194 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 RPEL1Q2QD12 228 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 CT45A1Q5HYN5 189 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 BHLHA15Q7RTS1 189 aaPredicted RBP17.32■□□□□ 0.36
COL18A1-207ENST00000473212 BAGE3Q86Y29 109 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 BAGE2Q86Y30 109 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 MMD2Q8IY49 270 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 DEFB108BQ8NET1 73 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 CT45A3Q8NHU0 189 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 PPP1R35Q8TAP8 253 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 ENY2Q9NPA8 101 aa17.32■□□□□ 0.36
COL18A1-207ENST00000473212 TRAV9-1A0A075B6T8 112 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 SNURFLB1AK76 121 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 M0R1B8 84 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 CDKN1AP38936 164 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 HSPE1P61604 102 aaKnown RBP17.31■□□□□ 0.36
COL18A1-207ENST00000473212 TPTE2P1Q5T6R2 138 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 C1orf162Q8NEQ5 155 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-207ENST00000473212 ITLN1Q8WWA0 313 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 TUBG2Q9NRH3 451 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 SLC25A15Q9Y619 301 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 SAA2-SAA4A0A096LPE2 208 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 SAA2P0DJI9 122 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-207ENST00000473212 C17orf58Q2M2W7 97 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 OR8I2Q8N0Y5 310 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 PARD6AQ9NPB6 346 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 TMEM14BQ9NUH8 114 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 V9GYV3 84 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 AKAP13Q12802 2813 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 PCNX1Q96RV3 2341 aa17.31■□□□□ 0.36
COL18A1-207ENST00000473212 GNG10P50151 68 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PRR20EP86478 221 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PRR20CP86479 221 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PRR20DP86480 221 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PRR20BP86481 221 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PRR20AP86496 221 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 MZT1Q08AG7 82 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PSG5Q15238 335 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 C22orf34Q6ZV56 151 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 DCAF16Q9NXF7 216 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 FOXA2Q9Y261 457 aaPredicted RBP17.3■□□□□ 0.36
COL18A1-207ENST00000473212 SPINK4O60575 86 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 MMP23AO75900 390 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 ESDP10768 282 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 PROCRQ9UNN8 238 aa17.3■□□□□ 0.36
COL18A1-207ENST00000473212 A0A1B0GWJ7 208 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 LINC00869P0C866 280 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms