RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
GCOM1-206ENST00000471563 SNHG12Q9BXW3 62 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 NGBQ9NPG2 151 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 ABCA4P78363 2273 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 F6UZH7 168 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 DEFA4P12838 97 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 BRWD1-AS2P59051 145 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 RPS16P62249 146 aaKnown RBP12.53□□□□□ -0.4
GCOM1-206ENST00000471563 LTC4SQ16873 150 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 Q8N7P7 452 aa12.53□□□□□ -0.4
GCOM1-206ENST00000471563 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
GCOM1-206ENST00000471563 HIVEP3Q5T1R4 2406 aa12.52□□□□□ -0.4
GCOM1-206ENST00000471563 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 FBXL19-AS1Q494R0 122 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 SSX8Q7RTT4 187 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 TCTEX1D1Q8N7M0 179 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 RAB1CQ92928 201 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 NAGKQ9UJ70 344 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 ACACBO00763 2458 aa12.52□□□□□ -0.41
GCOM1-206ENST00000471563 ATP5G3P48201 142 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 EDDM3BP56851 147 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 FAM222BQ8WU58 562 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 CCL13Q99616 98 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 WDR83OSQ9Y284 106 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 C15orf65H3BRN8 121 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 M0R143 59 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 SOX15O60248 233 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 NDUFB4O95168 129 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 OR10J1P30954 320 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 STUMQ69YW2 141 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 Q8TCH9 128 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 CBLN4Q9NTU7 201 aa12.51□□□□□ -0.41
GCOM1-206ENST00000471563 SPTBN1Q01082 2364 aaKnown RBP12.51□□□□□ -0.41
GCOM1-206ENST00000471563 C15orf62A8K5M9 175 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 CD3EP07766 207 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 DCHS2Q6V1P9 2916 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
GCOM1-206ENST00000471563 MGST3O14880 152 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 UBE2G2P60604 165 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 UTF1Q5T230 341 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 SAP30LQ9HAJ7 183 aa12.5□□□□□ -0.41
GCOM1-206ENST00000471563 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
GCOM1-206ENST00000471563 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 TRAV38-1A0A0B4J264 116 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
GCOM1-206ENST00000471563 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 SFTPCP11686 197 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 RAB4AP20338 218 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 CCL17Q92583 94 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 GAFA1Q96PS6 74 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 MDFIC2A0A1B0GVS7 189 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 ADH4P08319 380 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 CD1BP29016 333 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
GCOM1-206ENST00000471563 SGMS2Q8NHU3 365 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 NINJ1Q92982 152 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 TXNDC17Q9BRA2 123 aa12.49□□□□□ -0.41
GCOM1-206ENST00000471563 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.41
GCOM1-206ENST00000471563 NUPR1O60356 82 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 IRF2P14316 349 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 ADMP35318 185 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 LINC00205P59089 165 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 MPDU1O75352 247 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
GCOM1-206ENST00000471563 MRPL52Q86TS9 123 aaKnown RBP12.48□□□□□ -0.41
GCOM1-206ENST00000471563 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
GCOM1-206ENST00000471563 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 TRBV20OR9-2A0A075B6H5 130 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 SPINT2O43291 252 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 SELENOTP62341 195 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 TEX36Q5VZQ5 186 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
GCOM1-206ENST00000471563 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
GCOM1-206ENST00000471563 CFAP46Q8IYW2 2715 aa12.47□□□□□ -0.41
GCOM1-206ENST00000471563 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms