RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 DCSTAMPQ9H295 470 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 WDR54Q9H977 334 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 HES4Q9HCC6 221 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 HRASLSQ9HDD0 168 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 TMEM14CQ9P0S9 112 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 RBMX2Q9Y388 322 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 U3KQ87 197 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 RP1P56715 2156 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 E9PCH4 1651 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 LRPPRCP42704 1394 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 ALPK3Q96L96 1907 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 GOLGA8QA0A0J9YX86 632 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 M0R378 163 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 FAAHO00519 579 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 FADS2O95864 444 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 CLPSP04118 112 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 KRT7P08729 469 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 NUP62P37198 522 aaPredicted RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 RPS24P62847 133 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 FAM74A1Q5RGS3 127 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 IBA57Q5T440 356 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 C6orf52Q5T4I8 152 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 C5orf46Q6UWT4 87 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 SLC22A4Q9H015 551 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 NSRP1Q9H0G5 558 aaKnown RBP-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 FUT9Q9Y231 359 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 SIPA1L1O43166 1804 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 FLNCQ14315 2725 aa-0.44□□□□□ -2.48
COMMD3-209ENST00000471350 A0A1W2PP64 1363 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 NUP153P49790 1475 aaKnown RBP-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 CCDC160A6NGH7 325 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 FABP5P3A8MUU1 101 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 ZNF736B4DX44 427 aaPredicted RBP-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 K7EIL1 84 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 SNRNP200O75643 2136 aaKnown RBP-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 UBL3O95164 117 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 KRT75O95678 551 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 BAALC-AS2P0C853 105 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 FGF6P10767 208 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 MIFP14174 115 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 SPI1P17947 270 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 DDTP30046 118 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 CASQ1P31415 396 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 DNAL1Q4LDG9 190 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 SAPCD1Q5SSQ6 148 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 DPPA3Q6W0C5 159 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 LINC00322Q6ZN03 302 aaPredicted RBP-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 UBL4BQ8N7F7 174 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 GPR32P1Q8NGA4 272 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 OR2T27Q8NH04 317 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 HAVCR2Q8TDQ0 301 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 PPCDCQ96CD2 204 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 SERPINB11Q96P15 392 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 TMEM147Q9BVK8 224 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 TIPINQ9BVW5 301 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 BBS2Q9BXC9 721 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 ULBP3Q9BZM4 244 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 TLNRD1Q9H1K6 362 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 SPACA1Q9HBV2 294 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 ASCL3Q9NQ33 180 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 ENPP5Q9UJA9 477 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 TMEM94Q12767 1356 aa-0.45□□□□□ -2.48
COMMD3-209ENST00000471350 ANKRD17O75179 2603 aaKnown RBP-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 IGF2RP11717 2491 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 IGHV1-69-2A0A0G2JMI3 117 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 GOLGA8MH3BSY2 632 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 CCL25O15444 150 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 PROSCO94903 275 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 SPINK1P00995 79 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 CSTAP01040 98 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 CTSDP07339 412 aaPredicted RBP-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 CXCL2P19875 107 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 JOSD1Q15040 202 aaPredicted RBP-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 SYCP1Q15431 976 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 C12orf74Q32Q52 190 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 C1orf137Q5JT78 98 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 SYPL2Q5VXT5 272 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 SBSNQ6UWP8 590 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 Q6ZQT0 140 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 BLIDQ8IZY5 108 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 SPERTQ8NA61 448 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 OR4E2Q8NGC2 313 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 MCFD2Q8NI22 146 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 RBP7Q96R05 134 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 GINS4Q9BRT9 223 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 PRRG3Q9BZD7 231 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 CXorf21Q9HAI6 301 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 FKBP14Q9NWM8 211 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 MRM2Q9UI43 246 aaKnown RBP-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 COL4A5P29400 1685 aa-0.46□□□□□ -2.48
COMMD3-209ENST00000471350 TRAV12-1A0A0B4J245 112 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 TRAV1-1A0A0B4J248 108 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 A0A0D9SG52 128 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 C1orf232A0A0U1RR37 186 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 CCRL2O00421 344 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 AZIN1O14977 448 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 SULT1B1O43704 296 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 IL6P05231 212 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 GP1BAP07359 652 aa-0.47□□□□□ -2.48
COMMD3-209ENST00000471350 SRP19P09132 144 aaKnown RBP-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms