RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 GAFA1Q96PS6 74 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 C20orf144Q9BQM9 153 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
CDHR3-207ENST00000470188 KCNIP2Q9NS61 270 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 MGAQ8IWI9 3026 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 SOX15O60248 233 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 SFTPCP11686 197 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 CD1BP29016 333 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 YPEL3P61236 119 aaPredicted RBP16.54■□□□□ 0.24
CDHR3-207ENST00000470188 PAFAH1B2P68402 229 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 TMEM256Q8N2U0 113 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 NUP37Q8NFH4 326 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 TBX15Q96SF7 602 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 CCL13Q99616 98 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 WDR83OSQ9Y284 106 aa16.54■□□□□ 0.24
CDHR3-207ENST00000470188 SAA2-SAA4A0A096LPE2 208 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 TRAV3A0A0B4J244 114 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 ZNF705FA8MVS1 300 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 ZNF705DP0CH99 300 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 ZNF705BP0CI00 300 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 SAA2P0DJI9 122 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 PDLIM3Q53GG5 364 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 TMEM108Q6UXF1 575 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 OR5T1Q8NG75 326 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 RAB1CQ92928 201 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 WFIKKN1Q96NZ8 548 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 TXNDC17Q9BRA2 123 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 ELOVL5Q9NYP7 299 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 AKAP13Q12802 2813 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 A0A0G2JNJ9 132 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 DLL1O00548 723 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 PRRG2O14669 202 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 DLEU1O43261 78 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 IRF2P14316 349 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 VDAC2P45880 294 aaPredicted RBP16.53■□□□□ 0.24
CDHR3-207ENST00000470188 GNB1P62873 340 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 TCF23Q7RTU1 214 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 DOLPP1Q86YN1 238 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 CMTM2Q8TAZ6 248 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 Q9UFV3 132 aa16.53■□□□□ 0.24
CDHR3-207ENST00000470188 RPL29P47914 159 aaKnown RBP16.52■□□□□ 0.24
CDHR3-207ENST00000470188 SELENOTP62341 195 aa16.52■□□□□ 0.24
CDHR3-207ENST00000470188 RANP62826 216 aaKnown RBP16.52■□□□□ 0.24
CDHR3-207ENST00000470188 FAM216BQ8N7L0 139 aa16.52■□□□□ 0.24
CDHR3-207ENST00000470188 TMEM106BQ9NUM4 274 aa16.52■□□□□ 0.24
CDHR3-207ENST00000470188 THBS3P49746 956 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 TPPP2P59282 170 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
CDHR3-207ENST00000470188 ZNF788Q6ZQV5 615 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 LYG1Q8N1E2 194 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 Q8N7P7 452 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 ABHD17AQ96GS6 310 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 SFRP2Q96HF1 295 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 MIEN1Q9BRT3 115 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 DSCAMO60469 2012 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 TRAV9-1A0A075B6T8 112 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 C16orf97H3BN30 126 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 RRHO14718 337 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 ESDP10768 282 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 MRPS11P82912 194 aaKnown RBP16.51■□□□□ 0.23
CDHR3-207ENST00000470188 TEX43Q6ZNM6 134 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 SGMS2Q8NHU3 365 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 TMEM208Q9BTX3 173 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 IDI2-AS1Q9NZ38 188 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 TCF19Q9Y242 345 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 GOLT1BQ9Y3E0 138 aa16.51■□□□□ 0.23
CDHR3-207ENST00000470188 MDFIC2A0A1B0GVS7 189 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 NUPR1O60356 82 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 GFRA3O60609 400 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 DEFA4P12838 97 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 WFDC8Q8IUA0 241 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 ZNF439Q8NDP4 499 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 SPTBN2O15020 2390 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 GNG10P50151 68 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 CST9LP1Q5W188 147 aa16.5■□□□□ 0.23
CDHR3-207ENST00000470188 HCFC1P51610 2035 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 TRGV8A0A0C4DH27 118 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 C15orf61A6NNL5 157 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 MPDU1O75352 247 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 NDUFB4O95168 129 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 ADMP35318 185 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 CCL8P80075 99 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 TEX36Q5VZQ5 186 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 ABHD12Q8N2K0 398 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 ADTRPQ96IZ2 230 aa16.49■□□□□ 0.23
CDHR3-207ENST00000470188 LINC00614P0C842 121 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 C1QTNF9P0C862 333 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 TMEM183BQ1AE95 376 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 OR4A47Q6IF82 309 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 LINC00574Q9H8X3 128 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 PRSS46E5RG02 174 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 ATP5G3P48201 142 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 TREML4Q6UXN2 200 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 TOMM20LQ6UXN7 152 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 CORO2AQ92828 525 aa16.48■□□□□ 0.23
CDHR3-207ENST00000470188 RP1L1Q8IWN7 2480 aaPredicted RBP16.48■□□□□ 0.23
CDHR3-207ENST00000470188 RAI1Q7Z5J4 1906 aaPredicted RBP16.47■□□□□ 0.23
CDHR3-207ENST00000470188 A0A1B0GUS0 222 aa16.47■□□□□ 0.23
CDHR3-207ENST00000470188 DPRXA6NFQ7 191 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms